Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0362 ATGACCATGGTTCCTTATTCTCAAAACGGCAAGCATCATCATCAACAACAAAATAGGAGTACAAATACCAGTACCAATAATTATGCTCTTTACACTGCAAGTGCTATGAACCAAGTTGTTGAAGTTGAAGGCTACAATTACAACAATAATAATTGCTTTTTCTTAGGATCTGATTTTGTGGTGAGGCACATGATGGCTGAGGAGGATGAGTCAAGAGCCAACACCAATAGCACCACTCACATGGAACCACCTGAACAACCTCGTGAACCTGAAGCTGAAGCTGGTTCCACCTTAAAGGAAGAAGAAAGAGGAATCATCATCAACAACAACAACAACAATAGCAATAACTGGCTTCAATTGAGTATAGGTTTTCATCACCATCAGGGTTCAATAATGGCTCCAACAGGTTCATCATCAGGATCACAGCTTGTGGAGCTAGAGTTGCTACCTGGTGGAGTGCGCCATTTGAATTGGGGTGGTTCTTCTTCTTCTTCTTCTTCAAGGCCAAGCTTGGAGCCACAAGCTATGTTCCCTTTGGCTTCTTCTGAGATCATTAGAGGCTCAACAATACGGAGTAGTTATTGCCAAGGTGGAGGAGGGTCTAGTTTTGGTGGTTCTTCTTCTTTGCTTTTTGAACAAACGTCCATGTCCATGGCTTGTGGTCCTATTAGTGCTACAGCCTTTGGTCCTCACCAGCAACAACAATATCAGCCTCAAGAGATGGTTAACTGGGCATTTGGTCCATTACCTCATTCTATGGCTATTATGCCTTCTCCCTCTTTTGTTTCCTCTTCTTCTTCTTCTCCATCACAATCTTGTTCTTCTTTAAGGCCTCCTCCTATAGGGTCTTATTTCCCAACCCCCTTTCAATTCCCTTCTTCTGGGTTTGATCAATTTGATGTGGCTGGACCAAGCTCTCATGATGCCACTGTTAGAGTTGTTGATCCCCCTAGAAGACCTCATTCTGGAATTTGGTTCATGCTACAAGCTTCACAAAACCAAGCGAAAGAACCATTCTTGCCTCAAATACCAAAGAGCTACCTAAGAATCAAAGATGGAAGGATGACAGTTCGGTTGCTATTGAAGTATCTGGTTAGCAAACTCAGACTAGAGAGCGAATCAGAGGTAGAGATAACATGCAGAGGGCAACAACTTTTACCTTTCTTGACGTTGCAGCATGTGAGGGATAACATTTGGACTCATAGGGACACCACCACAAGGACTTTGCTTTCTGATTCCTCAACCACAGATCATGTAATGGTGCTACATTACGGTAGAAGCACTTCTTGA 1290 0.4302 MTMVPYSQNGKHHHQQQNRSTNTSTNNYALYTASAMNQVVEVEGYNYNNNNCFFLGSDFVVRHMMAEEDESRANTNSTTHMEPPEQPREPEAEAGSTLKEEERGIIINNNNNNSNNWLQLSIGFHHHQGSIMAPTGSSSGSQLVELELLPGGVRHLNWGGSSSSSSSRPSLEPQAMFPLASSEIIRGSTIRSSYCQGGGGSSFGGSSSLLFEQTSMSMACGPISATAFGPHQQQQYQPQEMVNWAFGPLPHSMAIMPSPSFVSSSSSSPSQSCSSLRPPPIGSYFPTPFQFPSSGFDQFDVAGPSSHDATVRVVDPPRRPHSGIWFMLQASQNQAKEPFLPQIPKSYLRIKDGRMTVRLLLKYLVSKLRLESESEVEITCRGQQLLPFLTLQHVRDNIWTHRDTTTRTLLSDSSTTDHVMVLHYGRSTS* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0362 429 Gene3D - 317 424 - -
Dod01g0362 429 PANTHER RING FINGER PROTEIN 1 427 - -
Dod01g0362 429 MobiDBLite consensus disorder prediction 1 23 - -
Dod01g0362 429 PANTHER RING FINGER PROTEIN 1 427 IPR044171 GO:0007275
Dod01g0362 429 MobiDBLite consensus disorder prediction 68 98 - -
Dod01g0362 429 MobiDBLite consensus disorder prediction 84 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0362 Dod-Chr1 6329791 6340430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0362 337 425 C3H Transcription Factor Family AT3G23060 38.043 5.77e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0362 - - lja:Lj1g3v3138970.1 372.474