Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0359 ATGGTGAAAGGAAGAACCAAAGCCATGTTCTCTCTCCTTTGGTGCTCCATTGCAATGTGTGTACTCCTTCAGCTATGTCACCTTGGAGTTGCACACCCTTCACACCCTCTTAGGATTTCTCGCTTACCAGGTCAACCCCATGTTGAGTTTCATCAGTTTTCAGGTTATGTCACCCTTGATCACAAGAAAAACCAGAGCCAGAAGAAAGCTCTTTTTTTCTACTTTGTTGAAGCTGAGAAGGATGCAGCTTCCAAACCCCTTGTTCTTTGGCTCAATGGAGGGCCTGGTTGTTCTTCTCTTGGAGTTGGTGCATTTTCAGAGAATGGACCATTTAGGCCTAAAGGAGAGGCCTTGGTTAGGAACCAATTCAGCTGGAACAGAGAGGCAAATATATTGTACTTGGAAACTCCAATTGGGGTTGGCTTCTCTTACTCAACTGATACTTCCTCTTATGAGGGTGTGAATGACAAGATTACAGCCAGGGATAACTTGGTATTCCTGCAAAACTGGTTTGTAAAGTTCCCAGACTACAGAAACAGAAGTTTGTTCATAGTAGGAGAAAGCTATGCTGGCCATTATGTTCCTCAACTGGCTGAGCTTATGCTCGAGTTCAACAGAAAGGAGAAGCTTTTCAATTTAAAAGGCATTGGTCTTGGTAACCCAGTTCTAGAGTTTGCAACAGATTTCAATTCTAGAGCTGAGTTCTTCTGGTCTCATGGACTAATCTCTGATTTAACATACCAAATGTTCACTTCTGTGTGCAACTATTCAAGATATGTGAGGGAATATTACACTGGTGCTGTTTCTCCTGTCTGTTCAAGGGTGATGAGCCAAGTTAGTACAGAAACAAGTAGATTTGTTGACAAGTATGATGTGACCCTTGATGTTTGTATATCTTCAGTGTTTTCACAATCCAAAGTCCTCAGTCCCCAGCAAGTTACTGAAACCATAGATGTATGCGTGGAAGATGAAACAGTCAATTATCTGAACAGGAAAGATGTGCAGTCAGCTTTACATGCACGTCTGGTTGGAGTACAAAGATGGTCTGCTTGCAGCAATGTACTGGATTATGAGCTGCGCAACTTGGAGATACCAACGATCACGGTCGTGGGCAATCTAGTCAAGGCAGGAATACCAGTATTGGTTTACAGTGGTGATCAGGATTCAGTTATTCCATTGACTGGGAGTAGAACATTAGTACATCAATTGGCAAAAGAACTGAGGTTGAATACCACTGTTCCATACCGGGTCTGGTTTGAGGGGCAACAGGTAGGTGGCTGGACTCAAGTTTATGGCAACATCCTTTCATTTGCCACAATTAGGGGAGCATCACATGAAGCTCCATTTTCGCAGCCTGAGAGATCACTTGTGCTGTTCAAGTCCTTCTTAGAAGGTCGACCTCTACCAGAAGAGTTTTGA 1419 0.4327 MVKGRTKAMFSLLWCSIAMCVLLQLCHLGVAHPSHPLRISRLPGQPHVEFHQFSGYVTLDHKKNQSQKKALFFYFVEAEKDAASKPLVLWLNGGPGCSSLGVGAFSENGPFRPKGEALVRNQFSWNREANILYLETPIGVGFSYSTDTSSYEGVNDKITARDNLVFLQNWFVKFPDYRNRSLFIVGESYAGHYVPQLAELMLEFNRKEKLFNLKGIGLGNPVLEFATDFNSRAEFFWSHGLISDLTYQMFTSVCNYSRYVREYYTGAVSPVCSRVMSQVSTETSRFVDKYDVTLDVCISSVFSQSKVLSPQQVTETIDVCVEDETVNYLNRKDVQSALHARLVGVQRWSACSNVLDYELRNLEIPTITVVGNLVKAGIPVLVYSGDQDSVIPLTGSRTLVHQLAKELRLNTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERSLVLFKSFLEGRPLPEEF* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0359 472 PANTHER CARBOXYPEPTIDASE 14 470 - -
Dod01g0359 472 ProSitePatterns Serine carboxypeptidases, serine active site. 184 191 IPR018202 GO:0004185
Dod01g0359 472 Pfam Serine carboxypeptidase 44 465 IPR001563 GO:0004185|GO:0006508
Dod01g0359 472 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 14 470 IPR001563 GO:0004185|GO:0006508
Dod01g0359 472 Gene3D alpha/beta hydrolase 36 469 IPR029058 -
Dod01g0359 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 144 IPR001563 GO:0004185|GO:0006508
Dod01g0359 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 435 448 IPR001563 GO:0004185|GO:0006508
Dod01g0359 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 133 IPR001563 GO:0004185|GO:0006508
Dod01g0359 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 195 IPR001563 GO:0004185|GO:0006508
Dod01g0359 472 SUPERFAMILY alpha/beta-Hydrolases 41 469 IPR029058 -
Dod01g0359 472 ProSitePatterns Serine carboxypeptidases, histidine active site. 435 452 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0359 Dod-Chr1 6293829 6297973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0359 328 468 Calmodulin-binding Proteins AT2G22960 27.660 7.04e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0359 K16297 - gmx:100805130 832.017