Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0358 ATGCAATTTGCAGATGGGGTTTTTGAGCATCTGAGAAAAATTCATGTTACTATGCTCATTCTTGAGCTTCAAAGATTGATTTGTAGTTATTGTGGCTTTGTATGTTGTGCTTCAATGGCTAATAGAAGACACATCCTTTCTTCTCTTGGAAAAGTGTTTTTGGCATTCCTTCTTGTGTTCTTGTTCAGCTTGAACAATAACACTGTACAGTGCCAGGGAAGGTTGAGTAAGCACATCTCTTCTGAGCATCCATCATCTTCTAGGCCAACACCAACACCATCACCATCACAATACAAGGATGACACTAGGAAGATTATTGTTAGTATAGTTTTAGGAGCAGTAACTGGAATAGTTGGTTCTATTCTCTTTGCACTTGTGGTTCGTTGTGTTGTTCAGTACCTTAACCGAACACCAATCCTCAAGGGCCCTGTCATATTCTCCCCAAAAATTGCCCCCAAGACACTACAATCAGCTTTGGCAAAAGAGAACCACTTGCTTGGTTCAAGTCCAAATGGGAAGTACTACAAAACGGTTCTTGACAATGGCCTCACAATTGCAGTCAAAAGCCTAACCCCCTTTGAGAGCAATTCACCAGAAACCAAGAGGAAATCTGTGAAGAGGCAGATACAGAAGGAGCTAGAGGTTCTCGCCGGCTTAAGAGACCGAAACTTGATGAGCTTAAGGGCCTATATTCGTGAACCTGATAGGTTCTCATTGGTTTATGATTATGTATCAACTGGGAGCCTTGCAGATGTGATGAATAGAGTGAGGGAAAATGAGTTGCAGCTTGGATGGGAAGTTAGGCTGAGAATTGCTGTTGGTGTGGTTAAAGGGCTTCAGTATCTCCACACTTGTGTGCCGCAGGTTCTGCACTATAACTTGAAGCTCACAAATGTTATGCTGGATGCTGAGTTTGAACCAAGATTAGCAGATTATGGATTGGCCAAACTTCTTCCCAACTTGGATAGAGGGACACCTGGCAACAGCCCTCCTGAGTGCTTCCATGATTGCAGCAGGTACACTGAAAAAAGTGACATCTTCAGTTTTGGCATGGTACTAGGTGTTTTGCTTAGTGGCAAGGATCCTACAGATCCATTCTTTGGAGAACCTGCAAGTGGGAGAAGTTTGGGGTGTTGGCTAAGACACTTGCAGCAAGCAGGTGATGCAAAGGAGGCTCTAGATAAGAGCATTCTTGGGGAAGAAGGTGAGGAAGATGAGATGCTAATGGCAGTAAGGATTGCTGCTGCATGCCTCTCTGATATGCCTGCAGATAGGCCTTCCAGTGAAGAGCTTGTTCACATGCTAACACAACTGCACAGTTTTTGA 1326 0.4382 MQFADGVFEHLRKIHVTMLILELQRLICSYCGFVCCASMANRRHILSSLGKVFLAFLLVFLFSLNNNTVQCQGRLSKHISSEHPSSSRPTPTPSPSQYKDDTRKIIVSIVLGAVTGIVGSILFALVVRCVVQYLNRTPILKGPVIFSPKIAPKTLQSALAKENHLLGSSPNGKYYKTVLDNGLTIAVKSLTPFESNSPETKRKSVKRQIQKELEVLAGLRDRNLMSLRAYIREPDRFSLVYDYVSTGSLADVMNRVRENELQLGWEVRLRIAVGVVKGLQYLHTCVPQVLHYNLKLTNVMLDAEFEPRLADYGLAKLLPNLDRGTPGNSPPECFHDCSRYTEKSDIFSFGMVLGVLLSGKDPTDPFFGEPASGRSLGCWLRHLQQAGDAKEALDKSILGEEGEEDEMLMAVRIAAACLSDMPADRPSSEELVHMLTQLHSF* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0358 441 ProSiteProfiles Protein kinase domain profile. 160 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0358 441 Gene3D Phosphorylase Kinase; domain 1 149 243 - -
Dod01g0358 441 Pfam Protein kinase domain 162 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0358 441 Gene3D Transferase(Phosphotransferase) domain 1 244 440 - -
Dod01g0358 441 MobiDBLite consensus disorder prediction 78 99 - -
Dod01g0358 441 SUPERFAMILY Protein kinase-like (PK-like) 163 435 IPR011009 -
Dod01g0358 441 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE CORYNE 53 441 - -
Dod01g0358 441 PANTHER - 53 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0358 Dod-Chr1 6288113 6291102 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0358 69 438 Receptor kinase-like Gene Family AT2G31880 31.235 1.15e-57 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Dod01g0358 Pkinase 3.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0358 - - gmx:102664273 635.18