Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0356 ATGGTTAAGGAGGAGCGAGTTAAACTCGAAGGCGCACCCGACGGCGCCGTCAACGGAGCTCCGCCGTATACGGCGGCGGACGGCGGAGACGACGGGAAACCGTCAGCGAGGCTACCGCGGTGGACGCGGCAGGAGATTCTGATCCTAATTCAGGGAAAAGCCGACGCCGAGAGCAAGTTCAGACCTGGCCGGTCCTCCGCCGTAGGCAGCGGTTCTCCGGCTATGGGTTCGCCGGAGCCGAAGTGGGCGCTGGTTTCGTCTTATTGCAAGAAGCACGGCGTGAACCGCGAACCGATTCAGTGCAGGAAGCGGTGGAGCAACCTCGCCGGCGATTACAAGAAGATCAAGGAGTGGGAGTCGCATGTGAGGGACGAAACGGAATCATTTTGGGCGATGAGGAACGATATGAGGAGGGAGAGGAAGTTGCCGGGGATTTTTGATAGGGAGGTGTACGATATACTCGATTCGGCGGTGGTTCCGGCGGGCTCTGCGGCGGTTACTGTGGCGGCTGCTGCGGCGGAGGAGGCGGAGGGTGGAGGTGATGCGGAGGTGCACATTTATGACAGTAATAGGAGGGTGGGTGGGGAGGATGGGTTGTTCTCGGATAGTGAGAGGGACGAGGCTTTTGTTGCCGCTGCTAAGGATGTTCCCGTGCCTGTTGTTCCTATCTCAGAAAAGCAATATCAGCCAGTCCTCCAAGTCTGCCTAGGGGAAGGCAATGCTCAAGGTGCTACTAATGAGAAACAGCCAGCCTCAAATCCAGAAATGGGTTCTACATCCCATGGGGAAAAGAAGAGGAAGCGGTTCACAACAGATGGAGAGGAGGAAACTTTGCAGAGTCAATTAATAGATGTCTTAGAAAGAAATGGCAGGATGCTGCGCGATCAACTTGAAGCTCAGAACATCAATTTCCAGTTGGATCGGCAGCAGCAGAAAGACACTGCAAGTAACATTGTTGCGGTACTTGATAAGCTTGCAGATGCTCTAGGGAGAATTGCTGATAAATTATAA 1011 0.546 MVKEERVKLEGAPDGAVNGAPPYTAADGGDDGKPSARLPRWTRQEILILIQGKADAESKFRPGRSSAVGSGSPAMGSPEPKWALVSSYCKKHGVNREPIQCRKRWSNLAGDYKKIKEWESHVRDETESFWAMRNDMRRERKLPGIFDREVYDILDSAVVPAGSAAVTVAAAAAEEAEGGGDAEVHIYDSNRRVGGEDGLFSDSERDEAFVAAAKDVPVPVVPISEKQYQPVLQVCLGEGNAQGATNEKQPASNPEMGSTSHGEKKRKRFTTDGEEETLQSQLIDVLERNGRMLRDQLEAQNINFQLDRQQQKDTASNIVAVLDKLADALGRIADKL* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0356 336 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 12 336 - -
Dod01g0356 336 MobiDBLite consensus disorder prediction 55 78 - -
Dod01g0356 336 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 12 336 - -
Dod01g0356 336 MobiDBLite consensus disorder prediction 259 274 - -
Dod01g0356 336 MobiDBLite consensus disorder prediction 241 258 - -
Dod01g0356 336 Pfam Myb/SANT-like DNA-binding domain 40 132 IPR044822 -
Dod01g0356 336 ProSiteProfiles Myb-like domain profile. 33 109 IPR001005 -
Dod01g0356 336 Gene3D - 41 114 - -
Dod01g0356 336 MobiDBLite consensus disorder prediction 1 38 - -
Dod01g0356 336 MobiDBLite consensus disorder prediction 241 277 - -
Dod01g0356 336 Coils Coil 294 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0356 Dod-Chr1 6242371 6246275 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dod01g0356 Myb_DNA-bind_4 3.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0356 - - gmx:100788594 485.723