Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0343 ATGGACACGCGCAGAGGGCCACGCGCCGTCGTTGACCCTAAGGTCCGAAAAGTCGGGTTCTTCACCCCGCCCGAACGGTCACAACCGGGTCCACCCGACCCGATCCCTCCCTCTTCCCTCTCTCCCGTCATGATCCCTCCGCCGCGCCACGCATCGGAAAATCTCCTCCTCCACCACCCTCGTCAAACTGCATTTGCTGCGACGGCGGCTTATTCTCTTTCGGTCGAGGATTCGGTTGTTGCAGGCGGAAGCTATGGAAGTTCGCCGGAGTTCTTTCCAGCTCCGATGTCTCCGGCTCCGTCTTCGTACTCCAGCAGCAGGATCTTCGGCGGCGGTGATGGAGATTGCTCCTTCGATGGAGCTTCTGCTGCTTCACCGGGATGCCGCGGCGGTGGCGGAGGAGGAGGGAAGGTGGTGGCGTCGGCGTCGTCGTTTCCTCGAGGCGAAATTGAGTTGGTGGCGGCGAAGGCGAGCAGCGTTCCGGCGAGTGGATTGACCACGGTCTCTGTGGTGAATGCTTCTTCCCTAGGGATTCGCGAAAGAGAGAAAGCAGACAATGGAGGAGGATCAGCAGTGGAAGTGAAAGAGCAAGGTACGAATTCAAAGCAGAAGAAAGATAAGACCACAAAAGCTGAAAGACGTGCTCTTCAAGAAGCACAGAGAGCTGCAAAGGCTGCTGCAAGAGCTGAAGGAAATAAGGCATCTGGAACTGTAACTTCTGGGAACCCAAAACCAGTGAAAGCTGCAAAGCCACTGCAAAAAGTAGATAATGCTTCAGTTGCAGCCTCTGAGAAAAAGGGAGGTGATCGTCCACCAGAAAAGGATAGAAAGAAAGATGTTCCTCAACCACGCATGCAATATGATGATGAAAGCAGAGTGGAGAAAGCTAAACGGCGTGCTGTGGTGAAGCAAACGGAAGCTAGGAACAGAGTTGAATTGTTCAGGCATTTGCCACAGTATGAACATGGGAGTCAGCTTCCAGATCTTGAGGCAAAGTTTTTCCAGCTTGATACTGTGCATCCTGCAGTTTATAAGGTGGGTTTGCAGTATCTGTCTGGTGATATATTTGGTGGTAATGCTCGTTGTATTGCAATGCTTCAAGCATTTCAAGGGGCCATCAAAGACTACAGTGTTCCATCTGAGAAGACTATTGTGAGAGACTTGACAGCAAAAATAAGTAGCTATGTTTCATTCCTTATTGAGTGTCGACCTCTTTCTATCAGCATGGGAAATGCAATTAGGTTTCTTAAAAGTCGAATCACCAAGCTACCTTTGACACTGTCTGAGTCAGAATCGAAAGCTTCTCTCCATTCAGATATCGAGCGTTTTATAAACGAGAAGATTATACTAGCTGACAAGGTGATAGTCAAGCATGCTGTCTCAAAAATAAGAGATGGTGATGTTCTTCTTACTTATGAGTCGTCATCTGCTGTTGAAATGATACTGTTACATGCACATGAGTTAGGGAAACAGTTTCGAGTTATAGTAGTTGACTCTCGTCCAAAGCTTAGAGGGAAACTTTTGCTTCGTAGGCTGGTGGAGAAAGGTCTTAACTGCACATACACTCATATAAATGCTGTTTCCTACATAATGCATGAAGTTACTCGGGTTTTTCTGGGCGCTTCATCGGTTTTGTCTAATGGAACAGTTTATTCGGGAGTTGGGACTGCAAGTGTTGCAATGATTGCTCATGCATTCCAGGTCCCTGTTTTAGTATGCTGTGAGGCTTATAAATTTCATGAAAGGGTACAGCTTGATTCAATATGCTCGAATGAACTCGGTGACCCAGAAGTCATTTCAAAGGTTCTGGGTAGAGAGGATGTCAACCACTTGGATGGCTGGGCCAATACTGAAAATCTGCAACTTTTAAATTTGATTTATGATGCAACACCTTCAGACTATGTTTCAATGATAGTAACAGACTATGGCATGGTCCCACCTACAAGTGTTCCTGTAATTGTAAGAGAATATAGGAGAGAACAGCTGTGGATATAA 1995 0.4727 MDTRRGPRAVVDPKVRKVGFFTPPERSQPGPPDPIPPSSLSPVMIPPPRHASENLLLHHPRQTAFAATAAYSLSVEDSVVAGGSYGSSPEFFPAPMSPAPSSYSSSRIFGGGDGDCSFDGASAASPGCRGGGGGGGKVVASASSFPRGEIELVAAKASSVPASGLTTVSVVNASSLGIREREKADNGGGSAVEVKEQGTNSKQKKDKTTKAERRALQEAQRAAKAAARAEGNKASGTVTSGNPKPVKAAKPLQKVDNASVAASEKKGGDRPPEKDRKKDVPQPRMQYDDESRVEKAKRRAVVKQTEARNRVELFRHLPQYEHGSQLPDLEAKFFQLDTVHPAVYKVGLQYLSGDIFGGNARCIAMLQAFQGAIKDYSVPSEKTIVRDLTAKISSYVSFLIECRPLSISMGNAIRFLKSRITKLPLTLSESESKASLHSDIERFINEKIILADKVIVKHAVSKIRDGDVLLTYESSSAVEMILLHAHELGKQFRVIVVDSRPKLRGKLLLRRLVEKGLNCTYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSGVGTASVAMIAHAFQVPVLVCCEAYKFHERVQLDSICSNELGDPEVISKVLGREDVNHLDGWANTENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIVREYRREQLWI* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0343 664 MobiDBLite consensus disorder prediction 1 51 - -
Dod01g0343 664 SUPERFAMILY NagB/RpiA/CoA transferase-like 311 657 IPR037171 -
Dod01g0343 664 PANTHER TRANSLATION INITIATION FACTOR EIF-2B DELTA SUBUNIT 3 664 - -
Dod01g0343 664 MobiDBLite consensus disorder prediction 25 44 - -
Dod01g0343 664 MobiDBLite consensus disorder prediction 266 301 - -
Dod01g0343 664 MobiDBLite consensus disorder prediction 198 219 - -
Dod01g0343 664 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 3 664 - -
Dod01g0343 664 MobiDBLite consensus disorder prediction 181 301 - -
Dod01g0343 664 Pfam Initiation factor 2 subunit family 355 647 IPR000649 GO:0044237
Dod01g0343 664 Gene3D - 451 657 IPR042529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0343 Dod-Chr1 5988287 5996205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0343 1 664 Eukaryotic Initiation Factors Gene Family AT5G38640 64.971 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0343 K03680 - gmx:100785938 915.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0343 01 5988287 5996205 Dod01g0343 01 5988287 5996205 ECH