Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0340 ATGTCTGACACCGTTGAGTCCATCAAGATTCTAGCATGCTGGCGGATTCTCTTCATATTCCTCCTTTGTGTCCTCATAAAACTCTTGTCACCACCACATGTTGCTTCGTTGGCATCTTCTGCAGCCACAGTTGCAACTGAAAACAGTGAAGCAAGTGCTCTCTTAAAGTGGAAAGCCAGCCTTGACAACCACACGATGTTGTCATCCTGGGCAGAGTTTGCCCAGACAATGGAAGTGACTGAGAAGTGTGATGTTTATAGCTTTGGAGTACTTTGTTTGGAGATCCTCATGGGGAAGCATCCAGCAGATATCATCACTTCATTGTTGTCATCATCAACAGCATCAGTGACTTACAATTTGCTATTGGTTGATGTTATAGACCAAAGGCCTCCTCATCCTGAGGATTCAGTTGTTGGGGGTATCATCTTGATTGCAAAGTTGGCACTTAGTTGCTTGAGTCAAAGTCCACATTCTCGCCCAACCATGGATCAAGTATCTAGACAGCTTATGATGGGAAAGTCACCTTTGGAAGAACAGTTTCCTATGATCAGACTTGGGCAACTCCACTAA 570 0.4439 MSDTVESIKILACWRILFIFLLCVLIKLLSPPHVASLASSAATVATENSEASALLKWKASLDNHTMLSSWAEFAQTMEVTEKCDVYSFGVLCLEILMGKHPADIITSLLSSSTASVTYNLLLVDVIDQRPPHPEDSVVGGIILIAKLALSCLSQSPHSRPTMDQVSRQLMMGKSPLEEQFPMIRLGQLH* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0340 189 SUPERFAMILY Protein kinase-like (PK-like) 72 176 IPR011009 -
Dod01g0340 189 Pfam Protein tyrosine and serine/threonine kinase 72 169 IPR001245 GO:0004672|GO:0006468
Dod01g0340 189 Gene3D Transferase(Phosphotransferase) domain 1 34 180 - -
Dod01g0340 189 PANTHER LRR RECEPTOR-LIKE KINASE 72 188 - -
Dod01g0340 189 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 72 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0340 Dod-Chr1 5841454 5844927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0340 72 169 Receptor kinase-like Gene Family AT1G16150 33.981 1.52e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod01g0340 PK_Tyr_Ser-Thr 2.3e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0340 - - gmx:100815688 182.185