Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0331 ATGGCTTCAACATCTCCTTCTCCAAATGCTTCTCCACCATCTTCTTCAACCCCACCATCGCCACCTAGTTCTCCTCAGCCAAATGAAACCTCAAATAAGACCCCTGCTCCTTCATCTCCTTCTGACCCTTCAGCTCCACCTCCATCTCCTCCTCAAGCAGTGTCTGCAACCCCTCCTTCTTCCCCATCACTTTCTCCTCCACCATCATCTACACCTCCCCCAACTTCATCCCCTCCTTCACCACCAGATTCTCCACCACCAGCATCACCACCACCTGCAGTTGCATCATCACCCCCTCCACCAGTTACCACTGCACCTCCTCCTGCTAAGACTTCACCTTCTGTTCCAACTTTATCCCCTCCACCTCCTGTTGTAGCTGGTTCCCCTCCTCCTCAATCCTCAAATGCACCTCCCAAAGAAAACCCACCGCCTTCTCAACCTATTTCGCCGTCGCCTCCTCCTCCAGCTAATGTGCCTAGGCCACCATCCAGCCCTTCTCCTCCTCCACCGCGGGGGAAGCCACCGGAGAGTTCTCCCTCACCTCCTTCGCACGCATCCCCTCCTACTGTTTCTAAATCTCCTCCTTCCACTGATGTTCCCCCTCCATCGACATTGCCATCCACTCCTCCTTCGCCTCCTTCTGCAGATGTTCCCCCTCCATCAACATTGCCATCAACTCCCCCTTCAGTCCCTTCTGCCTCTGCACCTCCAGCTTCTTTGCCTGCTCCCCCTGATAATAAAACACCAGCCGCGGGTTCACCTGCAGCGCTTCCCTCTGTTCCTACTGAGAAACCCACTGCTGGACCAACTAATAATGGCACTGACAATGTGACCACAAACACCGGATCTTCACATTCAGGAGGATTGAATTCTGGAGCAGCTGTGGCTATTGGCATTGTAGTTGGCTTTGTTGTCCTTAGCCTTCTTGTTATGGCTGTGTGGTTTGTAAAGAGAAAGAAGAAGAAGCAAATGGGATCAAAAGCTGGTTATGCTTTTCCTTCGCCATTTACCTCATCTCACAATTCAGGTACCTTATTCTTGAGGCCACAGTCTCCGGCTAACCTTTTAGTTAGTGGCTCTGGTAGTGATTTTGTGTATTCGCCATCAGAGCCAGGTGGCGTAAGTGGTTCAAGATCATGGTTCACATATGAAGAACTTGTTCAAGCTACAAATGGGTTTTCTGCACAAAATCTATTAGGAGAAGGTGGATTTGGTGCTGTCTACAAAGGTTTGCTTATAGATGGAAGACAAGTGGCTGTGAAACAGCTCAAAGTTGGTGGTGGGCAAGGGGAGCGTGAATTCAGAGCAGAAGTTGAGATTATTAGCCGTGTACATCATCGCCATCTGGTTTCCTTGGTCGGTTATTGTATATCCGAGCATCAAAGATTGCTTGTTTATGACTATGTCTCTAACAATACACTTCATTACCATCTTCATGGGGAAAACAGACCAGTTCTGGATTGGCCTACCAGAGTCAGGGTTGCTGCTGGGGCAGCTCGTGGAATAGCATACCTGCATGAAGACTGTCATCCACGCATTATTCATCGAGATATTAAGTCATCAAACATCCTTCTTGATCATAACTTTGAAGCCCAAGTTTCAGATTTTGGGCTTGCAAAATTGGCATTGGATACATATACACATGTTACTACCCGAGTAATGGGAACCTTTGGGTACATGGCACCGGAGTATGCAACAAGTGGGAAATTGACTGAAAAGTCCGATGTATATTCCTTTGGGGTAGTGCTTTTGGAGCTAATTACTGGTCGGAAGCCTGTCGATGTCTCTCAGCCAATTGGTGATGAGAGCCTGGTTGAATGGGCTCGGCCTCTGTTGATTGAAGCACTTGATAACGACGACTTTGATATTCTGGTGGATCCAAGACTGGAAAAGAACTACAATAGAAACGAAATGTTCCGGATGATTGAGGCTGCTGCAGCCTGCGTGCGACATTCTGGAATAAAGAGGCCGCGGATGAGTCAGGTGGTGAGAGCTTTAGATTCCTTAGATGAATTTGCGGATCTCAACAATGGAATGAAACCAGGTCAGAGTTCAGTCTTCGATTCTGCGCAGCAATCGGCACAGATCAGAATGTTTAGGAGAATGGCTTTTGGAAGCCAAGATTATAGTTCCAGTTTCTTTAATGAAACTCAGAGTAGCTGGAGGAGTAGAGATCAGGAGGACTCGACAACTATATTCCCTCAAAATAAATCCGGGCCTAGTAACATTTGA 2232 0.4798 MASTSPSPNASPPSSSTPPSPPSSPQPNETSNKTPAPSSPSDPSAPPPSPPQAVSATPPSSPSLSPPPSSTPPPTSSPPSPPDSPPPASPPPAVASSPPPPVTTAPPPAKTSPSVPTLSPPPPVVAGSPPPQSSNAPPKENPPPSQPISPSPPPPANVPRPPSSPSPPPPRGKPPESSPSPPSHASPPTVSKSPPSTDVPPPSTLPSTPPSPPSADVPPPSTLPSTPPSVPSASAPPASLPAPPDNKTPAAGSPAALPSVPTEKPTAGPTNNGTDNVTTNTGSSHSGGLNSGAAVAIGIVVGFVVLSLLVMAVWFVKRKKKKQMGSKAGYAFPSPFTSSHNSGTLFLRPQSPANLLVSGSGSDFVYSPSEPGGVSGSRSWFTYEELVQATNGFSAQNLLGEGGFGAVYKGLLIDGRQVAVKQLKVGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISEHQRLLVYDYVSNNTLHYHLHGENRPVLDWPTRVRVAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDHNFEAQVSDFGLAKLALDTYTHVTTRVMGTFGYMAPEYATSGKLTEKSDVYSFGVVLLELITGRKPVDVSQPIGDESLVEWARPLLIEALDNDDFDILVDPRLEKNYNRNEMFRMIEAAAACVRHSGIKRPRMSQVVRALDSLDEFADLNNGMKPGQSSVFDSAQQSAQIRMFRRMAFGSQDYSSSFFNETQSSWRSRDQEDSTTIFPQNKSGPSNI* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0331 743 MobiDBLite consensus disorder prediction 264 287 - -
Dod01g0331 743 SUPERFAMILY Protein kinase-like (PK-like) 371 666 IPR011009 -
Dod01g0331 743 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 127 721 - -
Dod01g0331 743 ProSitePatterns Protein kinases ATP-binding region signature. 399 421 IPR017441 GO:0005524
Dod01g0331 743 SMART serkin_6 393 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0331 743 Gene3D Transferase(Phosphotransferase) domain 1 469 685 - -
Dod01g0331 743 ProSiteProfiles Protein kinase domain profile. 393 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0331 743 ProSitePatterns Serine/Threonine protein kinases active-site signature. 513 525 IPR008271 GO:0004672|GO:0006468
Dod01g0331 743 MobiDBLite consensus disorder prediction 1 287 - -
Dod01g0331 743 Gene3D Phosphorylase Kinase; domain 1 372 468 - -
Dod01g0331 743 MobiDBLite consensus disorder prediction 11 28 - -
Dod01g0331 743 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 127 721 - -
Dod01g0331 743 MobiDBLite consensus disorder prediction 719 743 - -
Dod01g0331 743 Pfam Protein tyrosine and serine/threonine kinase 396 665 IPR001245 GO:0004672|GO:0006468
Dod01g0331 743 MobiDBLite consensus disorder prediction 39 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0331 Dod-Chr1 5697502 5703809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0331 261 726 Trihelix Transcription Factor Family AT5G38560 69.133 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Dod01g0331 PK_Tyr_Ser-Thr 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0331 - - gmx:100784873 870.537