Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0301 ATGCAGGCCACCAGTGAGATCACAGGGCTCAATTATTTTCTCCCTTCAGACACATCCCTTTACCAGGATCACTACACCATGATCCACAACAACAACACCCCAACATTTCAACCACACAAATTCTCCAACCAACAATTCTATGGTTTCCATCAGAACCCCCCTCAAGTGCTTGCAGACTTTAGTAGTCCTCAATCATCATGCATCAGCAACAACTCAACCTCTGATGAAGCAGATGAGCAGCAGCAAAGCCTCATCAATGAGAGGAAGCACAGGAGGATGATATCAAACCGAGAGTCGGCGCGCCGGTCAAGGATGAGGAAGCAGAAGCACCTTGATGAGCTTTGGTCACAGGTGGTTTGGCTCAGGAATGAGAACCACCAGCTAGTAGACAAGCTGAACCATGTGTCAGAGTCACATGATAGAGTCCTTCAAGAGAATGTTCAGCTGAGGGAGCAAGCTTCAGAACTTAGACAGATGCTATGTGACATGCAGCTACATAGTCCATGCCCTCCCTTGAGCCCCTTTGAAGATCATGATGTACCTTGCAGCCCAGAGTACCTCAATTCTGACTCCTCAAACCAATCCACCACAAGTTCCATGAACATGCTTGGCTAA 615 0.4764 MQATSEITGLNYFLPSDTSLYQDHYTMIHNNNTPTFQPHKFSNQQFYGFHQNPPQVLADFSSPQSSCISNNSTSDEADEQQQSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLVDKLNHVSESHDRVLQENVQLREQASELRQMLCDMQLHSPCPPLSPFEDHDVPCSPEYLNSDSSNQSTTSSMNMLG* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0301 204 CDD bZIP_plant_GBF1 89 140 IPR045314 GO:0003700|GO:0006355
Dod01g0301 204 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 91 106 IPR004827 GO:0003700|GO:0006355
Dod01g0301 204 MobiDBLite consensus disorder prediction 180 204 - -
Dod01g0301 204 SMART brlzneu 84 148 IPR004827 GO:0003700|GO:0006355
Dod01g0301 204 Coils Coil 139 159 - -
Dod01g0301 204 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 195 IPR044521 -
Dod01g0301 204 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 86 149 IPR004827 GO:0003700|GO:0006355
Dod01g0301 204 MobiDBLite consensus disorder prediction 60 82 - -
Dod01g0301 204 Pfam bZIP transcription factor 88 145 IPR004827 GO:0003700|GO:0006355
Dod01g0301 204 SUPERFAMILY Leucine zipper domain 88 138 IPR046347 GO:0003700|GO:0006355
Dod01g0301 204 MobiDBLite consensus disorder prediction 185 204 - -
Dod01g0301 204 Gene3D - 86 141 - -
Dod01g0301 204 PANTHER BZIP TRANSCRIPTION FACTOR 1 195 - -
Dod01g0301 204 MobiDBLite consensus disorder prediction 60 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0301 Dod-Chr1 5422301 5423315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0301 1 182 bZIP Transcription Factor Family AT3G30530 53.723 1.48e-52 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod01g0301 bZIP_1 5.6e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0301 - - aprc:113863596 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0301 01 5422301 5423315 Dod01g0301 01 5422301 5423315 ECH
Dod02g2348 02 51662270 51662932 Dod01g0301 01 5422301 5423315 PCT