Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0285 ATGGCTGGTGAAGCTTATTTAGTGATCATATGTGTGTCTTTTGGTGTGGCCCTTGGAGTTTTGATAGCTTGCCTCATATTTTTCGGCATAAGGCGGTACAAGAAGCGTGCTCATCTTAGAAGATCTGCAAATGAGCCTAGTTCAACAACTCTCCCAATAAGAACAAATGGATTAGGAACAAGCACTGCGCTTAGTGCTTCTCTCACTGGTTCCATTTCCATAGCCACTCAAGTGTCAGATAATCTACAAAGAAAGTCCCATTTCACTTGGAGGAATCATCAAAATAAGGATCCAGTTGCTCCTGCATCAGGCATTCTGAAGTACTCATACAAAGAAATTCAAAAGGCCACACAGAACTTCACAAATAAATTGGGACAAGGATCATTTGGCACAGTTCATAAAGCCACAATGCCTACAGGAGAGGTGGTGGCTGTGAAGATGCTTGCACCCAATTCCAGACAAGGGGAAAAAGAATTCCAAACAGAGGTACTTCTGCTAGGAAGACTGCATCATCGGAATCTTGTGAATTTGGTAGGATACTGTGTAGAAAAAGGACAGCGTATACTGGTTTATGAGTTCATGAGGAATGGAAGTTTAGCAAATCTTTTATATGGTGAAGATAAGGAATTGAGTTGGGATGAAAGGCTGCAAATTGCTGTTGATATTTCCTATGGAATACAATACCTTCATGAAGGAGCAGTCCCACCAGTCATTCATCGCGATTTGAAATCTGCCAACATATTGCTAGATCACTCAATGAGAGCTAAGGTTGCTGATTTTGGGCTCTCAAAGGAAGAGGTGTTCGATGACCGGAATTCTGGTCTCAAAGGTACATATGGCTATATGGACCCAGCATACATCTCCACAAGCAAGTTTACAACGAAGAGTGACATCTACAGTTTTGGCATAATAATTTTTGAGCTCATCACTGCCATCCAAGCACATCAAAATTTGATGGAATATATCAAACTTGCTGCAATGGATTATGATGGCATAGATGGGATTCTTGACAAGCAACTTGTTGGAAAATGCAACCTTGAAGAAGTGAGGCAGCTTGCTAAAATTGCACATAAATGTTTGCACAAATCACCTAACAAACGGCCCTCTATAAATGAGGTATCACAAGGTATATTGATGATAAAGCAAAGGCGCCTTGTGAAGGAAGACACTATGTCATTTGCAAGCAGTAACTTCTCAAGAGCTGTGAGTCGGGTAGAGGATCAACAGGTTGAATTAAGTAGGATAGTCACCATTAACCAAAGAGAAAGCAGGTGA 1275 0.411 MAGEAYLVIICVSFGVALGVLIACLIFFGIRRYKKRAHLRRSANEPSSTTLPIRTNGLGTSTALSASLTGSISIATQVSDNLQRKSHFTWRNHQNKDPVAPASGILKYSYKEIQKATQNFTNKLGQGSFGTVHKATMPTGEVVAVKMLAPNSRQGEKEFQTEVLLLGRLHHRNLVNLVGYCVEKGQRILVYEFMRNGSLANLLYGEDKELSWDERLQIAVDISYGIQYLHEGAVPPVIHRDLKSANILLDHSMRAKVADFGLSKEEVFDDRNSGLKGTYGYMDPAYISTSKFTTKSDIYSFGIIIFELITAIQAHQNLMEYIKLAAMDYDGIDGILDKQLVGKCNLEEVRQLAKIAHKCLHKSPNKRPSINEVSQGILMIKQRRLVKEDTMSFASSNFSRAVSRVEDQQVELSRIVTINQRESR* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0285 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Dod01g0285 424 ProSitePatterns Protein kinases ATP-binding region signature. 124 146 IPR017441 GO:0005524
Dod01g0285 424 Pfam Protein tyrosine and serine/threonine kinase 120 375 IPR001245 GO:0004672|GO:0006468
Dod01g0285 424 Gene3D Phosphorylase Kinase; domain 1 80 193 - -
Dod01g0285 424 SMART serkin_6 118 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0285 424 SUPERFAMILY Protein kinase-like (PK-like) 89 374 IPR011009 -
Dod01g0285 424 ProSiteProfiles Protein kinase domain profile. 118 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0285 424 CDD STKc_IRAK 124 375 - -
Dod01g0285 424 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 2 9 421 - -
Dod01g0285 424 Gene3D Transferase(Phosphotransferase) domain 1 194 401 - -
Dod01g0285 424 PANTHER OS01G0750732 PROTEIN 9 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0285 Dod-Chr1 5201730 5206122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0285 85 382 Receptor kinase-like Gene Family AT1G79620 42.357 1.54e-70 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Dod01g0285 PK_Tyr_Ser-Thr 2.6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0285 - - gmx:100794239 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0285 01 5201730 5206122 Dod01g0285 01 5201730 5206122 ECH
Dod02g2364 02 51894649 51899382 Dod01g0285 01 5201730 5206122 PCT