Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0271 ATGGGTTCTGCTTGTTGTTGTTTGAGGGTTGATGATTTTGAAGATTATGTGAATCCAAATAGTTCTGTATACAGGAACTGTGTGTGTCTCAGTTGCTTCGTACAAAACTTTTTGAATGTGTATGCATCAATATTTCGTAGAGGGGAACTGCATTCGATCCCTTCATCTATACAGGGGGCAGCATCTATGACGTCGACAGCATCACTTGATAATTCTCTATCTGACATGTACCGTTCTCCTCCAAGGCCCTTGCCTTATGATGCAGACCCCAGGTATTTCCGCTCGCAGCGTGATGGACTAGTTTCAAGACGTGAGAAGGGTTCAAGTCATTCGAATGAGGAATCACAACCTCTGAGAAGTGATGTAGATGGGGACCCAGAACCAGAATCTTTCAATTCAGGCAACAAGTGGAATGAATGTGCTGGTGAAGATGGATCCAAGGAATATCGTCCTAAGTCCTCACTGAGACTTTCATCGGCAAAACCTACAACTGGAGTTGGGCTTGTCTATTCATCATCAGAAGAGGAGGATGTCTGTCCAACTTGTCTTGAAGAATACACTGAAGAGAATCCAAAGATAGTGACAAAATGCTCTCATCATTTCCATCTTGGTTGCATTTATGAGTGGATGGAGAGAAGTGACAACTGTCCAGTTTGTGGGAAGGTGATGGTATTCGATGAAACGACCTAA 690 0.4333 MGSACCCLRVDDFEDYVNPNSSVYRNCVCLSCFVQNFLNVYASIFRRGELHSIPSSIQGAASMTSTASLDNSLSDMYRSPPRPLPYDADPRYFRSQRDGLVSRREKGSSHSNEESQPLRSDVDGDPEPESFNSGNKWNECAGEDGSKEYRPKSSLRLSSAKPTTGVGLVYSSSEEEDVCPTCLEEYTEENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMVFDETT* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0271 229 MobiDBLite consensus disorder prediction 91 126 - -
Dod01g0271 229 SMART ring_2 179 219 IPR001841 -
Dod01g0271 229 SUPERFAMILY RING/U-box 174 226 - -
Dod01g0271 229 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 228 - -
Dod01g0271 229 MobiDBLite consensus disorder prediction 72 160 - -
Dod01g0271 229 ProSiteProfiles Zinc finger RING-type profile. 179 219 IPR001841 -
Dod01g0271 229 Pfam RING-H2 zinc finger domain 174 219 IPR024766 GO:0008270
Dod01g0271 229 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 228 - -
Dod01g0271 229 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 161 226 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0271 Dod-Chr1 5067637 5076107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0271 1 228 C3H Transcription Factor Family AT5G15790 60.776 2.54e-95 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0271 - - gmx:100788192 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0271 01 5067637 5076107 Dod01g0271 01 5067637 5076107 ECH