Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0258 ATGAGGCTTGTCATATTATCTCTCTTTGTTCTTGTGCTATTTTCTTGTGCAGCTGCATATGATCCTTTGGATCCAAATGGAAACATAACAATCAAATGGGATGTTGTGTCTTGGACACCAGATGGCTATGTGGCAGTGGTAACAATGAGCAATTTCCAAATGTTTCGGCACATAATGAATCCTGGATGGACTTTGGGATGGACATGGGCTAAGAAAGATGTTATATGGTCCATGGTAGGAGCACAAACCACATGA 255 0.4118 MRLVILSLFVLVLFSCAAAYDPLDPNGNITIKWDVVSWTPDGYVAVVTMSNFQMFRHIMNPGWTLGWTWAKKDVIWSMVGAQTT* 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0258 84 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Dod01g0258 84 PANTHER PROTEIN COBRA 3 84 IPR006918 GO:0010215|GO:0031225
Dod01g0258 84 Pfam COBRA-like protein 43 84 IPR006918 GO:0010215|GO:0031225
Dod01g0258 84 PANTHER COBRA-LIKE PROTEIN 3 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0258 Dod-Chr1 4916765 4917363 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0258 17 84 COBRA Gene Family AT5G15630 83.824 1.09e-38 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0258 - - gmx:100783410 162.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0258 01 4916765 4917363 Dod02g2383 02 52346510 52348858 PCT