Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0257 ATGTCAGCATGGGGCCAAGACCCTTCATTGGCGGTCTCATCCTTCCAAGTGAGCATTGGCCAAGCCGGCACCTCAAACAAGACAGTTAAACTCCCCAAGAACTTCACTCTCTTGGGTCCAGGACCTGGCTATACCTGTGGCCCTGCCAAAGTTGTTCCCTCCACCACTTTCCTTACACCTGACAAGCGCCGCAAGACTCAAGCACTGATGACATGGAATGTTACCTGCACCTACTCACAATTTCTGGCTAGAAAGAACCCAAGCTGCTGTGTATCTTTGTCATCCTTCTACAATGAAACCATTACCCCTTGTCCCACGTGTGCATGTGGCTGCCAGAACAAGAAGAATTGTGTCAAGAGTGACTCTAAACATCTCAACATGGTAGGGGCTCACACTCCAAAGAAAGACAATGAACCATTGCTGCAGTGCACTCATCATATGTGCCCAATCAGGGTACATTGGCATGTGAAGATCAACTATAAGGACTATTGGCGAGTCAAGATCGCAGTAACGAATTTCAATTACAGAATGAATTACACGCTCTGGAGTCTTGCTGTCCAGCATCCAAATCTAAACAATGTCACCCAAGTTTTCAGCTTTGATTACAAGCCACTGCTTCCCTATCAGTCCATCAATGACACTGGTATGTTCTATGGCATGAAATATTACAATGATCTATTAATGGAAGCTGGACCAACTGGGAATGTTCAATCAGAAGTGCTTCTTCAAAAGGACAAGGATACCTTCACACTGAAGCAGGGATGGGCAGTTTCCACGCAAGGTCTACTTTAA 792 0.4583 MSAWGQDPSLAVSSFQVSIGQAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTTFLTPDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITPCPTCACGCQNKKNCVKSDSKHLNMVGAHTPKKDNEPLLQCTHHMCPIRVHWHVKINYKDYWRVKIAVTNFNYRMNYTLWSLAVQHPNLNNVTQVFSFDYKPLLPYQSINDTGMFYGMKYYNDLLMEAGPTGNVQSEVLLQKDKDTFTLKQGWAVSTQGLL* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0257 263 Pfam COBRA-like protein 2 79 IPR006918 GO:0010215|GO:0031225
Dod01g0257 263 PANTHER COBRA-LIKE PROTEIN 2 258 - -
Dod01g0257 263 PANTHER PROTEIN COBRA 2 258 IPR006918 GO:0010215|GO:0031225
Dod01g0257 263 PIRSF COBRA 1 261 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0257 Dod-Chr1 4915575 4916637 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0257 1 212 COBRA Gene Family AT5G15630 83.962 1.72e-135 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0257 - - gmx:100783410 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0257 01 4915575 4916637 Dod01g0257 01 4915575 4916637 ECH
Dod02g2383 02 52346510 52348858 Dod01g0257 01 4915575 4916637 PCT
Dod01g0257 01 4915575 4916637 Dod02g2384 02 52348868 52352465 PCT