Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0255 ATGGCACAATCATTCGGTCAGACCGAGATTAACTGGGACAAGCTAGATAAAACTAGGTTCTATGTCATTGGAGCTGGACTCTTCACAGGTGTTACGGTAGCACTTTATCCGGTTTCTGTTGTCAAAACTAGGCTGCAGGTTGCTACAACTGATGTCATAGATAGAAATGCATTCTCTGTTGCAAAAGGGTTACTTAAAACCAATGGCATTCCTGGTTTGTACAGAGGGTTTGGCACAGTTATCACTGGCGCAATCCCTGCCAGGATCATATTCCTCTCTACTTTGGAGGCCACAAAGTCGGCTACCTTCAGAATGCTCGAACCATTTAGGCTATCTGAAACGGCCAAGGCAGCCGTTGCAAATGGAGTTGCAGGCATGACATCGTCGCTTCTAGCTCAATCTGTGTTTGTTCCGATTGATGTGGTTAGCCAAAAGTTGATGGTGCAAGGATACTCAGGCCATGCCCAGTACAGTGGGGGTCTGGATGTAGCCCGTAAGGTTTTAAGGTCTGATGGCATCAGAGGATTATATCGAGGATTCGGTCTATCTGTTATTACTTATGCACCTTCTAGTGCTGTATGGTGGGCAAGTTATGGTTCAAGCCAACGTTTCATTTGGAGATTCTTGGGCCATGGTAGCGGATATGACGAAAGCACTCCTAGTGTGCAGAAGATTATGTTAGTTCAGGCTACTGGAGGGGTTATTGCTGGTGCAACCGCATCCTGCATTACGACCCCATTGGATACTATAAAGACACGATTACAGGTGATGCAACTTGAAAAGAGAAGCTCTGTAAAACAAGTTGCAAAAGATTTAATCCGCGAAGATGGTTGGAAAGGCTTTTATAGAGGGTTTGGTCCAAGATTTTTTAGCATGTCAGCATGGGGTACTTCAATGATATTAACTTATGAGTATCTAAATACAAGAGCATATTCCTGTGGTCATCGAATCTGGGTCCTATGGTTGAAAATCATTCACGATAAGATAATCACAAATGCAAAACTCTATACGTAA 1014 0.4369 MAQSFGQTEINWDKLDKTRFYVIGAGLFTGVTVALYPVSVVKTRLQVATTDVIDRNAFSVAKGLLKTNGIPGLYRGFGTVITGAIPARIIFLSTLEATKSATFRMLEPFRLSETAKAAVANGVAGMTSSLLAQSVFVPIDVVSQKLMVQGYSGHAQYSGGLDVARKVLRSDGIRGLYRGFGLSVITYAPSSAVWWASYGSSQRFIWRFLGHGSGYDESTPSVQKIMLVQATGGVIAGATASCITTPLDTIKTRLQVMQLEKRSSVKQVAKDLIREDGWKGFYRGFGPRFFSMSAWGTSMILTYEYLNTRAYSCGHRIWVLWLKIIHDKIITNAKLYT* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0255 337 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 7 307 - -
Dod01g0255 337 ProSiteProfiles Solute carrier (Solcar) repeat profile. 17 101 IPR018108 -
Dod01g0255 337 ProSiteProfiles Solute carrier (Solcar) repeat profile. 116 204 IPR018108 -
Dod01g0255 337 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 7 307 - -
Dod01g0255 337 SUPERFAMILY Mitochondrial carrier 13 306 IPR023395 -
Dod01g0255 337 Pfam Mitochondrial carrier protein 228 308 IPR018108 -
Dod01g0255 337 Pfam Mitochondrial carrier protein 26 101 IPR018108 -
Dod01g0255 337 Pfam Mitochondrial carrier protein 118 205 IPR018108 -
Dod01g0255 337 PRINTS Mitochondrial carrier protein signature 177 195 IPR002067 GO:0055085
Dod01g0255 337 PRINTS Mitochondrial carrier protein signature 233 255 IPR002067 GO:0055085
Dod01g0255 337 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Dod01g0255 337 Gene3D Mitochondrial carrier domain 21 313 IPR023395 -
Dod01g0255 337 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 309 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0255 Dod-Chr1 4899769 4904762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0255 10 307 Chloroplast and Mitochondria Gene Families AT5G15640 73.333 6.84e-162 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0255 K15121 - gmx:100781796 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0255 01 4899769 4904762 Dod01g0255 01 4899769 4904762 ECH
Dod02g2386 02 52483479 52494114 Dod01g0255 01 4899769 4904762 PCT