Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0228 ATGTCTGAAAAGTCTTTGAAATCCATGAAGGATGAAAACTCAGATTTGCAGAAGCAGATTGGATGCATTGCTGGATTCTTTCAGCTCTTTGACCGCCACCGTTTCCTCACAGGCCAACGCACTAGCAGCCACATTCATCACAGACCTACTTCAGGTGGAAGCAGCAGTAATGACATCAAGGAGCCTACAAGTACCATGCAGAAAGCAACGGCAAAGAGTCTAAAGGTTGCAAGAGAGAAGCAACAATTCTCCAGAGAGTCATCAATAGCTTCTATGTCTTCATCATCTTGTTCATCTAGTATGTCATCGCTAGAGTTTAACAGAACTATTCAGCCAGAATCACTATCAACCGGCCAAATCAAACTTTCAGAACACCAAAGTTCAGAGCTAGCAGTGAAGCAACTTGATGGCCAAGGCCAGAAATCCCTTGACTTCTATGATATTGTCAAGGACTCAATGCATAGAGAAGCTCAAGGATTGTATGTGAAGACTTTGCCAAAAGAGCAAAAGAAGGGTCAGACTCATACCTTGAAATGCATAGACTCCCCAAGGCCTTTACAGCCCCACAAATCTGTCAGCGGAGGAGTTATGGTCTCCAATGAAGCATTCCATAATCTTGGTAAGTCTAAGAAAGCACCTTGGGACTCACCACGACTCTCTTATGATGGGAGGTATGTACAAGATACATTCAGAGCTGCAACAAAGCAGAAGGAGCTGCCAAGGTTTTCCTTGGACAGCAGAGAAGGATCCATTAGAGGTTGCAATGAAGGAAACAAGTCTAGCAACCTATTGAAGGGTCCTCAAAAAGGGTATGTGAGGAACTCAATCACAATGCTTAACCAGCTCCAAGAACCAGACACTTCAAGAAGATCATCTAGTGTTGTAGCAAAGTTAATGGGACTGGAAGCATTTCCATCCTGGTCACAAACTTGTGAGACTCCACCGGGTACTACTAGCAATAATAAAAATGAGCTCTTGGCGAGATCAAGAGCTAGTGATGAATACAAGCAAAGCCGAAGTTCTGGATCTCCGTGGAGTTGCCAAGGTTCCACCTTGCCTCAGTCTAGCGGGGCTGATTCAATCACAAATGTGACACCATATTCACGGTTTGCGCTAGAAACAAGTCCATGGAGGCAACCTGATGCAAGCCAAAGCTCTCAATTGCAAGTTTCCAAGGGAAGTGAATCCAATACAAAGGCCTCAAAGTCCTCCCCCTCTGTATATGGTGAAATTGAGAAAAGGCTGGCAGAACTTGAGTTCAAAAAGTCTGGAAAGGATCTCAGAGCCCTTAAACAGATTCTTGAAGCAATGCACAGATATAAAGATTCATCCGATAGTACTAGTGATCAGGCTTCAAATTCTCCATCTGACAGTAGTAATAACAGTAGTCTCAATCAAAGCTCAAAAGTACAAAGCCCCAGAATCCGACAAAAGGAGCCAACATCTGTCACAAATGAAATGTCAAACACGAGCCAGGATTGTAAATTGCCAATTGTCATCATCAAATCAGCAAAAGTTACTAGAAAAGCCAATGGTCCTTCTTCTGCAGAACTGTCGATTCGTGGTAAATCTGGTTTCAGCAAGTGTTGCCCTGGTAATCCCACAAATGGAAGATTGGTTGACAAGCAAACATCCAAAGGTATCAGTTCAACAATAAAAAATTTGAAGGACCCTTATAGTCAACCTATTCATTCAGCAAATAAGAGTAATAACATGAGAACTTCAAAATCAATGCAATCCATGAAAGTTCCTCAAGACAGCAATGGAGAAAACACCAACTCTGGTAATGTAACAGTTACCAGTAGCCCCAGGCTACAGAAGAAGTTTGGCTTGGAGAGGCGTTCTCCACCAACTAGTCCATCATCAGATTCCAGCATTAGCAGAAGGCAACGTAATAGGAACTCTGTGGAATTGTCTTCTTCCCCAAGCACAACACCGAGACAAAAATTCTCTACTTTGCAGGAAAGAAATGAATGTTTTGGTGAGAGCAGCTGTCACTGGAGGGATTTTAGGCATCGTGTTAACGTCATTTCTCCAGATTTTGACAGCAAAAGAATCTTGCCCACTTATAGTGACATGGAAGTCATTCACATTGATCAATCGGGAAAGATCAATAGCGCCTGCATCCAGCTGAGTGGCCTTAATCAAAATATTGCAGTCAAAGATTTGAGCAAGGGAAGATCCAAGGCTGAGACAATAGTTACTACAGAACAACCAAGTCCTGTGTCTGTTCTTGATGCTGCATTCTATAGAGAAGACCCACCATCTCCAGTGAGAAAGAAATCACACATCTCAGAAGATTCAGTTGAAGTTCTAAGCGCCTATGAGGATAGCGAAGAGAACTCAGTGGATCTTCCTTTATCCAACACAGCAAAAGCCAACTTCAGCACTGGATCTGGTGACAGAGATTTGAACACCCAGAATCTGGCTCAAATACTTCAGGAATTCGATGAGAAACTCAACAGTTTCAGTGACAGTAAGGATCCTGACCATAAATACATAGTAGAAATTCTGTTAGCATCAGGTCTACTCAGTGGTCCCACCTCTAGCCAGACTTCACAATCACCAGGTCACTTGATTAACCCAAAGTTGTTCTTTGCACTAGAACAAACAAAAACAAACAAGAGGAACTTTAATATTGAAGGCAGTGCAAAGAAGATTGGCAGGATTACTAATCCGGAGCAAATGCAAAGAAAACTCATATTTGATGTCGTTAATGACATTTTACTCCAAAAATTAATATTGGAGAGTTCTAACACTTTGTGGTGCCTACCAAATGAGCTATCAGGTAGAAGACTAAAAGGGGAGCAGCTTTTGGTTGAGCTATGCACAGAAATAGACCAGTTACAACCTCAAAATAGGGATGTCGGTCTGGCCGATGAGGATGAGAATTTGCCAAATCTCTCATGGAGGGATTTGATGCATCATTCCACAGTTTGGACTAACTGCTGCATTGAGATGCCAAATGTTGTGTTGGATATTGAACGGTTGATCTTTAAAGATTTGATAACTGAAGTTGTGAGAGGTGAAGTAGCAAACAGTGCTGGTAGGCATTGCAGGCAACTGGTGTTTCCCAGTTAG 3081 0.4242 MSEKSLKSMKDENSDLQKQIGCIAGFFQLFDRHRFLTGQRTSSHIHHRPTSGGSSSNDIKEPTSTMQKATAKSLKVAREKQQFSRESSIASMSSSSCSSSMSSLEFNRTIQPESLSTGQIKLSEHQSSELAVKQLDGQGQKSLDFYDIVKDSMHREAQGLYVKTLPKEQKKGQTHTLKCIDSPRPLQPHKSVSGGVMVSNEAFHNLGKSKKAPWDSPRLSYDGRYVQDTFRAATKQKELPRFSLDSREGSIRGCNEGNKSSNLLKGPQKGYVRNSITMLNQLQEPDTSRRSSSVVAKLMGLEAFPSWSQTCETPPGTTSNNKNELLARSRASDEYKQSRSSGSPWSCQGSTLPQSSGADSITNVTPYSRFALETSPWRQPDASQSSQLQVSKGSESNTKASKSSPSVYGEIEKRLAELEFKKSGKDLRALKQILEAMHRYKDSSDSTSDQASNSPSDSSNNSSLNQSSKVQSPRIRQKEPTSVTNEMSNTSQDCKLPIVIIKSAKVTRKANGPSSAELSIRGKSGFSKCCPGNPTNGRLVDKQTSKGISSTIKNLKDPYSQPIHSANKSNNMRTSKSMQSMKVPQDSNGENTNSGNVTVTSSPRLQKKFGLERRSPPTSPSSDSSISRRQRNRNSVELSSSPSTTPRQKFSTLQERNECFGESSCHWRDFRHRVNVISPDFDSKRILPTYSDMEVIHIDQSGKINSACIQLSGLNQNIAVKDLSKGRSKAETIVTTEQPSPVSVLDAAFYREDPPSPVRKKSHISEDSVEVLSAYEDSEENSVDLPLSNTAKANFSTGSGDRDLNTQNLAQILQEFDEKLNSFSDSKDPDHKYIVEILLASGLLSGPTSSQTSQSPGHLINPKLFFALEQTKTNKRNFNIEGSAKKIGRITNPEQMQRKLIFDVVNDILLQKLILESSNTLWCLPNELSGRRLKGEQLLVELCTEIDQLQPQNRDVGLADEDENLPNLSWRDLMHHSTVWTNCCIEMPNVVLDIERLIFKDLITEVVRGEVANSAGRHCRQLVFPS* 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0228 1026 MobiDBLite consensus disorder prediction 552 655 - -
Dod01g0228 1026 MobiDBLite consensus disorder prediction 253 269 - -
Dod01g0228 1026 MobiDBLite consensus disorder prediction 374 405 - -
Dod01g0228 1026 MobiDBLite consensus disorder prediction 336 361 - -
Dod01g0228 1026 MobiDBLite consensus disorder prediction 39 62 - -
Dod01g0228 1026 PANTHER LONGIFOLIA PROTEIN 1 1025 IPR033334 GO:0051513
Dod01g0228 1026 MobiDBLite consensus disorder prediction 247 269 - -
Dod01g0228 1026 PANTHER LONGIFOLIA PROTEIN 1 1025 - -
Dod01g0228 1026 MobiDBLite consensus disorder prediction 615 655 - -
Dod01g0228 1026 MobiDBLite consensus disorder prediction 374 408 - -
Dod01g0228 1026 MobiDBLite consensus disorder prediction 552 605 - -
Dod01g0228 1026 Pfam Domain of unknown function (DUF4378) 830 1005 IPR025486 -
Dod01g0228 1026 MobiDBLite consensus disorder prediction 42 62 - -
Dod01g0228 1026 MobiDBLite consensus disorder prediction 446 490 - -
Dod01g0228 1026 MobiDBLite consensus disorder prediction 329 361 - -
Dod01g0228 1026 MobiDBLite consensus disorder prediction 441 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0228 Dod-Chr1 4268034 4273672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0228 136 1021 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 31.689 3.43e-84 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0228 - - adu:107486612 1243.41