Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0225 ATGACTGATAGTCCAAAAGAATCAGATTTTCCATTGAAACAGGAGGGTCATTCAAGTGATCATGAAAAGGAAAAGGCACCATCCACCTCATCATCATCACAATGGTTAAGGTTGAAGGATCCAAGAATTGTTCGAGTATCTAGAGCCTTTGGAGGAAAAGACAGGCACAGCAAGGTTTGCACAATAAGAGGATTGAGAGACAGGCGTGTGAGGCTTTCAGTACCAACTGCTATTCAGCTTTATGATCTTCAAGACAGGCTAGGGCTCAATCAGCCTAGCAAGGTTGTTGATTGGTTGCTCAATGCAGCAAAGCATGAGATTGATGAACTCCCTCCACTTCCAAATATTAACATTCCACCAGGGAACTTCACCCTTGATTTTCCATCTTCTATGATCACTTCCAATGAAGCTAGCACCTCTCAGCCAAATAATAATGAGCAAATGTTCAATAACATCAATAGGAGCATTCAGTGGGGGGAAGGTTCAAGCCAAAATTCTATGTGGAAATCAAAGTCTAAAGAAGCTTCAGATCAAGAAATGGTTGCTGATAAAGCAAATTGGATGAATAAAAGTACCACTGAAGAGGATAAACAAGGAAGCAATAAGGAAGGTCAAGGTGCACATCTTTTGGAAGGTAATAGTACTCTCTTACCAAGACCAAATCATCCTTCATTTTTGGGCTTGCTGAGTACTATGCCACTTGGTTACCAATGGGAGCCTTCAGGTGATGTTGCTCATCAATTGGGAAACCACCATGGATTTACAAACCACACAGATCTTCACAGCATCAATGGTGTGCCATTCCCATCAACATTGTCTTTATCAACTGGGAATCCTCAAATTTTGGTGTGTCCTCCCGGATCAACACAGTCATATTTCCCTTCATATGTCACAACAGCAATGGAATTGGATCCAAGGCAAATCAACCATTATCAGATGTTGACCTCAAGTTCTCAAAATCTCTTGACAACGAGTTCTCTCAATCCATCATCATTCAGCTTGGCCATGATGACCCCAAAACTTCTCCATTCTCCCAACACCAGGGAAAGCCCATCTCATCATAATAAAGACCATGATTTTCCTTCCAAGTGA 1092 0.4158 MTDSPKESDFPLKQEGHSSDHEKEKAPSTSSSSQWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLPNINIPPGNFTLDFPSSMITSNEASTSQPNNNEQMFNNINRSIQWGEGSSQNSMWKSKSKEASDQEMVADKANWMNKSTTEEDKQGSNKEGQGAHLLEGNSTLLPRPNHPSFLGLLSTMPLGYQWEPSGDVAHQLGNHHGFTNHTDLHSINGVPFPSTLSLSTGNPQILVCPPGSTQSYFPSYVTTAMELDPRQINHYQMLTSSSQNLLTTSSLNPSSFSLAMMTPKLLHSPNTRESPSHHNKDHDFPSK* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0225 363 MobiDBLite consensus disorder prediction 1 35 - -
Dod01g0225 363 MobiDBLite consensus disorder prediction 347 363 - -
Dod01g0225 363 MobiDBLite consensus disorder prediction 191 213 - -
Dod01g0225 363 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 1 356 - -
Dod01g0225 363 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 356 IPR005333 GO:0003700
Dod01g0225 363 MobiDBLite consensus disorder prediction 1 27 - -
Dod01g0225 363 MobiDBLite consensus disorder prediction 160 179 - -
Dod01g0225 363 ProSiteProfiles TCP domain profile. 52 110 IPR017887 -
Dod01g0225 363 MobiDBLite consensus disorder prediction 342 363 - -
Dod01g0225 363 Pfam TCP family transcription factor 52 198 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0225 Dod-Chr1 4240774 4245667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0225 35 313 TCP Transcription Factor Family AT3G02150 41.581 1.29e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dod01g0225 TCP 1.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0225 - - gmx:100816424 441.425