Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0219 ATGGAGAAGCTCGAGGTGTTTGACCTTGAAGGGAATTTGATGACCGGTTACCTCCCGGTTCGGTTCACTGGGTTGAGGAACTTGAGGGTTCTGAATCTAGGGTTTAATAGGATTGTTGGGGAGATACCTAGTTCGTTTTCTAGTCTTGTGAATTTGGAGGTTTTGAATTTGGCTTCTAATGGGATCAATGGTTCTGTGCCTGGCTTTGTTGGTAGGATGAGAGGGGTGTATTTGTCTTTTAACATGCTTGTTAGTGAGATTCCTAAGGAGATTGGGGAGGATTGTGGGAAGCTTGAGCATTTGGATTTGGCTGGTAATCTGTTGGTTCAGGGGATTCCAGCGAGTTTGGGGAATTGTAGTGAGTTGAGGACGCTTTTGTTGTATTCGAATATATTGGTTGATGTTATTCCTGCTGAGCTCGGTAAGCTTAAGAAGCTTGAGGTGTTGGATGTCTCGAGGAACACTCTTGGAGGGCTGGTTCCTCGTGAGCTGGGGAACTGCTCAGAGTTGTCTGTGCTTGTGCTGTCAAATCTTTTCAATCCGATCCCTGATTTCAATGATACTGTGCAGGAGTCTTTGATGGAGCAGTTGGTTTCTGTAACGGATGAGTATAATTATTTTGAAGGCCCTGTCCCTGAGGAAATTATGAGCCTTCCGAAGCTGAGGATATTGTGGGCACCTAGGGCGAATCTGGAAGACGGTTTTCCAAGCAGTTGGGGCCCTTGTGATAGCTTAGAGATGGTCAATTTGGCACAAAATGATTTGAGTGGGGATTTTCCTAGTCAGCTTAGTCGCTGCAAGAATCTCCATTTTCTTGATTTGAGCTCGAATGTCCTTACTGGCAAGCTTGCTGAAGAACTTCATGTTCCATGTATGACTCTGTTTGATGTTAGTGGAAATGCCTTATCTGGCCCAATTCCTGAATTCTTTAATTGCACACGTCCCTCAGTTCCTTCATGGGATGGAAATCTGTTTAGTAGTGCCGACAGAGCCCTTCCTTATGGGTCCTTTTTTGCATCGAAGGCAGTTGAAGGAACTGTTTTGTCGTCACTCGGTGAAGTTGACCGAACAATTTATCACAGCTTTGCTCAAAACAAATTTTTGAGCGTGCATTCTTTGCCAATAGCGCGTGAGAGGCTGGGGAAGGGATTTCTTTACACTTTTCTTATTGGAGAAAATAATCTGACCGGACCGTTTCCTACCAATCTATTCGAGAAATGTGATGGATTAAATGCATTGCTTTTAAATGTCAGCTATACTAGGTTATCTGGTCAGATTCCTTCCAAGATTGGCGGAATTTGCCGATCATTAAAACTGTTGGATGCATCTGGAAATCAGATTACAGGGTCAATCCCCCTTGGTTTAGAAGATTTGGTGTCTCTTGTTTCTTTGAACCTTAGCTGGAACCACTTACAAGGTCAGATTCCCACCAGGCTTGGCCAGATGAAAGATCTGAAGTTGCTCTCTTTGGCTGGTAATAACTTAAATGGCTCCATTCCTACCAGCCTTGAGCAGTTGTACTCTTTAGAAGTCTTGGACCTGTCTTCAAACTCTCTTACTGGTGAAATTCCAAAAGGCATTGTGAACTTGAGAAATCTCACTGTTGTTTTGCTCAATAACAACAAACTTTCTGGACAGATTCCTGCCGGTTTGGCAAATGTCACCACACTCTCAGCATTTAACGTGTCATTCAATAACTTATCTGGATCCTTGCCATCAAATAATAACTTGATAAAATGCAGCAGTGCCGTTGGGAATCCATATTTAAGTTCTTGCCGTGGATATTCTCTCACTGGGCCATCAGCAAGTCAGCAAGGGGTGGTTGGTGATTTTAATTCTTATACTGCTCCACCGCCAGAAACTACCGCCAGAAAGAGCAGTAATGGTTTCAATTCTATTGAAATCGCATCTATAACTTCTGCAGCAGCCATTGTTTCTGTTCTTATAGCCCTAATTATCCTTTTCATTTACACACGGAAATGGAACTCAATGTCCAGGGTTACTGGGTCCACAAGAAAAGAAGTTACAGTGTTCAATGATATTGGGGTTCCATTGACATTTGAAACTGTCGTCCGTGCCACAGGAAACTTCAATGCAAGCAACTGCATTGGGAGTGGGGGATTTGGAGCAACCTATAAGGCAGAGATATCACCTGGGAACTTAGTTGCAATAAAACGTCTTGCGGTTGGACGATTCCAAGGTGTTCAACAATTCCATGCAGAGGTTAAGACCCTTGGAAGGCTTCATCATCCAAATCTTGTTACTCTGATTGGTTATCATGCTAGTGAGACTGAGATGTTTCTCATATACAACTATTTGCCAGGTGGTAATCTGGAAAAGTTTATTCAGGAGAGGTCCACGAGGGCTGTAGATTGGAGAATTCTTCACAAGATTGCACTGGACATAGCCCGTGCACTTGCATATCTGCATGATCAGTGTGTACCACGCGTCCTCCATCGCGATGTCAAGCCTAGCAATATCTTGTTGGATGATGATTATAATGCTTATCTGTCTGATTTTGGACTGGCCAGGCTTCTGGGAACGTCAGAAACCCATGCTACCACTGGCGTAGCAGGAACATTTGGCTATGTGGCTCCCGAATATGCGATGACTTGTCGTGTTTCTGATAAGGCTGATGTGTATAGCTATGGTGTGGTGCTTCTAGAATTACTTTCAGACAAGAAGGCATTGGATCCTTCATTTTCTTCATATGGGAATGGTTTCAACATAGTTGCATGGGCATGCATGCTACTGCGGCAAGGCCGGGCGAAGGAGTTCTTCACCGCTGGCTTATGGGATGCAGGACCTGCAGATGATTTGGTAGAGGTCCTACACTTAGCTGTTGTGTGTACGGTTGACTCTCTATCTACCAGACCTTCAATGAAGCATGTCGTACGGCGGCTTAAGCAACTTCAACCGCCATCATGCTAG 2931 0.4415 MEKLEVFDLEGNLMTGYLPVRFTGLRNLRVLNLGFNRIVGEIPSSFSSLVNLEVLNLASNGINGSVPGFVGRMRGVYLSFNMLVSEIPKEIGEDCGKLEHLDLAGNLLVQGIPASLGNCSELRTLLLYSNILVDVIPAELGKLKKLEVLDVSRNTLGGLVPRELGNCSELSVLVLSNLFNPIPDFNDTVQESLMEQLVSVTDEYNYFEGPVPEEIMSLPKLRILWAPRANLEDGFPSSWGPCDSLEMVNLAQNDLSGDFPSQLSRCKNLHFLDLSSNVLTGKLAEELHVPCMTLFDVSGNALSGPIPEFFNCTRPSVPSWDGNLFSSADRALPYGSFFASKAVEGTVLSSLGEVDRTIYHSFAQNKFLSVHSLPIARERLGKGFLYTFLIGENNLTGPFPTNLFEKCDGLNALLLNVSYTRLSGQIPSKIGGICRSLKLLDASGNQITGSIPLGLEDLVSLVSLNLSWNHLQGQIPTRLGQMKDLKLLSLAGNNLNGSIPTSLEQLYSLEVLDLSSNSLTGEIPKGIVNLRNLTVVLLNNNKLSGQIPAGLANVTTLSAFNVSFNNLSGSLPSNNNLIKCSSAVGNPYLSSCRGYSLTGPSASQQGVVGDFNSYTAPPPETTARKSSNGFNSIEIASITSAAAIVSVLIALIILFIYTRKWNSMSRVTGSTRKEVTVFNDIGVPLTFETVVRATGNFNASNCIGSGGFGATYKAEISPGNLVAIKRLAVGRFQGVQQFHAEVKTLGRLHHPNLVTLIGYHASETEMFLIYNYLPGGNLEKFIQERSTRAVDWRILHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDYNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWACMLLRQGRAKEFFTAGLWDAGPADDLVEVLHLAVVCTVDSLSTRPSMKHVVRRLKQLQPPSC* 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0219 976 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 1 975 - -
Dod01g0219 976 Gene3D Phosphorylase Kinase; domain 1 658 772 - -
Dod01g0219 976 Pfam Protein kinase domain 700 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0219 976 ProSitePatterns Protein kinases ATP-binding region signature. 703 725 IPR017441 GO:0005524
Dod01g0219 976 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 1 975 - -
Dod01g0219 976 Gene3D Ribonuclease Inhibitor 188 323 IPR032675 -
Dod01g0219 976 SUPERFAMILY Protein kinase-like (PK-like) 679 968 IPR011009 -
Dod01g0219 976 SUPERFAMILY L domain-like 385 612 - -
Dod01g0219 976 SMART serkin_6 697 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0219 976 ProSitePatterns Serine/Threonine protein kinases active-site signature. 817 829 IPR008271 GO:0004672|GO:0006468
Dod01g0219 976 Gene3D Transferase(Phosphotransferase) domain 1 773 973 - -
Dod01g0219 976 Pfam Leucine Rich Repeat 145 167 IPR001611 GO:0005515
Dod01g0219 976 Pfam Leucine Rich Repeat 97 119 IPR001611 GO:0005515
Dod01g0219 976 Pfam Leucine Rich Repeat 27 49 IPR001611 GO:0005515
Dod01g0219 976 Pfam Leucine Rich Repeat 508 530 IPR001611 GO:0005515
Dod01g0219 976 CDD STKc_IRAK 703 971 - -
Dod01g0219 976 ProSiteProfiles Protein kinase domain profile. 697 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0219 976 Gene3D Ribonuclease Inhibitor 343 603 IPR032675 -
Dod01g0219 976 Gene3D Ribonuclease Inhibitor 1 187 IPR032675 -
Dod01g0219 976 SMART LRR_typ_2 506 529 IPR003591 -
Dod01g0219 976 SMART LRR_typ_2 25 48 IPR003591 -
Dod01g0219 976 SMART LRR_typ_2 458 482 IPR003591 -
Dod01g0219 976 SMART LRR_typ_2 49 71 IPR003591 -
Dod01g0219 976 SMART LRR_typ_2 95 119 IPR003591 -
Dod01g0219 976 SMART LRR_typ_2 143 166 IPR003591 -
Dod01g0219 976 SMART LRR_typ_2 530 553 IPR003591 -
Dod01g0219 976 SUPERFAMILY L domain-like 3 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0219 Dod-Chr1 3749547 3753307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0219 1 976 Receptor kinase-like Gene Family AT3G02130 67.576 0.0 1252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Dod01g0219 Pkinase 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0219 - - gmx:100803058 1546.95