Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0207 ATGGCTAAGTCTCCCTCTTTGTTTCCTTTGGCCCTTTTCATGTCTCTCTTCCTCCAAGCTATGTCAGCCGGTATTGACAATCATTGGCACGGTAATGCTCATGCAACATTCTATGGTGACATGCACGGTGGAGAAACCATGCAGGGTGCATGTGGCTATGGTGATCTATTCAAGCAAGGGTATGGTCTTGAGACCACAGCACTAAGCACTGCTCTATTCAACGATGGATACGCATGTGGTTCATGTTTTGAGATCAACCGGGATCGACGTGTTCCATGCATAAAAAATGGGGGTGTCAAGTTTCAGTTTAGTGGGAACCCTTATTGGTTGCTAGTGTTGGTTTACAATGTTGCCAATGCTGGTGAAGTCTCTAGTGTTAGCATTAAAGGTTCAAATAGTGGGTGGCTTCCTATGTCAAAAAATTGGGGACAGAATTGGCTAACTGGGGTTAACTTGGCTGGACAAAGCTTGTCATTCAAGGTGACAACCAGTGATGGGAAAACTTTGAGGTTTCATAATGTCACCTCTTCTAATTGGCAATTTGGAACAACTTACGAGGGCAAAAACAATTTCTAG 576 0.4392 MAKSPSLFPLALFMSLFLQAMSAGIDNHWHGNAHATFYGDMHGGETMQGACGYGDLFKQGYGLETTALSTALFNDGYACGSCFEINRDRRVPCIKNGGVKFQFSGNPYWLLVLVYNVANAGEVSSVSIKGSNSGWLPMSKNWGQNWLTGVNLAGQSLSFKVTTSDGKTLRFHNVTSSNWQFGTTYEGKNNF* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0207 191 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 48 99 IPR007112 -
Dod01g0207 191 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 108 187 IPR007117 -
Dod01g0207 191 PANTHER EXPANSIN 89 189 - -
Dod01g0207 191 PANTHER EXPANSIN 12 86 - -
Dod01g0207 191 SUPERFAMILY Barwin-like endoglucanases 29 116 IPR036908 -
Dod01g0207 191 PANTHER EXPANSIN-A15 89 189 IPR002963 GO:0009664
Dod01g0207 191 PANTHER EXPANSIN-A15 12 86 IPR002963 GO:0009664
Dod01g0207 191 Gene3D - 18 102 IPR036908 -
Dod01g0207 191 Gene3D - 103 188 IPR036749 -
Dod01g0207 191 PRINTS Expansin/Lol pI family signature 47 65 IPR007118 GO:0005576
Dod01g0207 191 PRINTS Expansin/Lol pI family signature 29 44 IPR007118 GO:0005576
Dod01g0207 191 PRINTS Expansin/Lol pI family signature 69 87 IPR007118 GO:0005576
Dod01g0207 191 SUPERFAMILY PHL pollen allergen 95 187 IPR036749 -
Dod01g0207 191 Pfam Expansin C-terminal domain 99 174 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0207 Dod-Chr1 3443798 3444878 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0207 24 191 Expansin Gene Family AT5G39260 44.196 1.36e-55 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0207 - - mtr:MTR_0008s0120 250.751