Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0182 ATGCCCAGCTTCTCCTCTCTCCCTGGGTGGATTGGTCGACTATTCAATTCTCATTCTCAGAACAACACAGGCAGCAATGGCGGGGACAGTAGCACCGGTAGTAGCAACGATGCAACGGCTGTGGCTGATGAAAGCTTCGGCGGAGCGGTGGAGTGTTATGCCTGTACGCAAGTAGGCGTGCCGGTGTTCCACTCCACCAGCTGCGATAGCTGTCACCAGCCACAATGGGAGGCCTCAGCAGGCTCTTCCTTGATTCCCATCCAGAACCGATCTCGAAAGACCCCAGCTGCCCGGACTTCCCCGCGGGCAGCACTCTCAGGGCCGTTCGGGCGGGTTCTAGACCCGAGGAGCAAGCGCGTGCAGGTGTGGAACCGGGCGCTGCTGATAGCGCGTGGGGTGGCGCTGGCGATAGACCCTCTGTTCTTCTACGCGCTGTCGATAGGAAGGGGAGGGTCGCCGTGCCTGTACATGGACGGTGGGTTGGCGGCGATGGTGACGGTGGCTCGGACGTGCGTGGACGCGGTGCACCTGGTGCACGTGTGGCTGCAGTTCAAGCTGGCGTACGTTTCGAGGGAGTCGCTGGTGGTCGGGTGCGGGAAGCTGGTGTGGGACGCGCGTGAGATCGCGTCGCACTACCTGCGCTCCACGAAAGGGTTCTGGTTTGATGCCTTCGTCATTCTTCCCGTTCCGCAGGCTGTGTTTTGGTTAATAGTACCCAAGTTGATTAGAGAAGAGCGAATTAAAATCATCATGACCATAATGCTGCTAATTTTTTTGTTCCAATTTCTCCCTAAGGTTTACCATAGCATCTGCATGATGAGAAGAGTGCAGAAAGTCACAGGCTACATCTTTGGCACCATTTGGTGGGGCTTTGCCCTTAATCTCATAGCTTACTTCATCGCTTCACATGTTGCTGGAGGGTGCTGGTATGTCCTTGCGATTCAACGCGTCGCTTCATGCCTGCAGCAGCAGTGTGAAAAAACTAGAGGATGCAATCTCTCTCTGTCATGCTCTGAGGAGGTATGCTACCAGTTTCTGTTACCAGCAGGCACAATAGGGAATCCATGTGGTGGGAATTCAACAGTGGTGAAAAAGCCTTTGTGCTTAGATGTTGAGGGGCCTTTCAGATATGGTATATACCAATGGGCACTTCCTGTCATATCCAGCAACTCTTTGGCTGTGAAGATTCTTTATCCTATTTTTTGGGGTTTGATGACCCTTAGCACTTTTGGCAATGATCTTGAACCTACAAGTGACTGGCTAGAAGTGATTTTCAGCATATGCATTGTACTCAGTGGACTACTGCTATTTACTTTGTTGATTGGTAACATCCAGGTATTCTTACATGCAGTCATGGCAAAGAAGAGAAAAATGCAGCTGAGATGCCGTGACATGGAATGGTGGATGAAGAGGAGGCAGCTGCCATCCCGATTGAGACAAAGAGTTCGCCATTTTGAACGTCAGAGATGGGCAGCCATGGGAGGAGAAGATGAGATGGAATTGATTAAAGACTTGCCTGAAGGGCTGAGGAGGGACATCAAGCGCTATCTTTGCCTAGACCTCATTAAAAAGGTACCTCTTTTCCACAACTTGGATGATCTTATTCTAGACAACATCTGTGACAGGGTTAGGCCACTAGTCTTCTCCAAAGATGAAAAGATTATCAGAGAAGGTGACCCAGTTCCAAGGATGGTGTTCATCGTCCGAGGACGCATAAAACGCAACCAAAGCCTCAGCAAAGGCATGGTGGCCTCTAGCATCCTTGAACCAGGAGAGTTCTTAGGAGATGAGCTTCTTTATTGGTGCCTAAAGCGCCCATTCATAGACAGGCTTCCGGCATCATCAGCAACATTTGTGTGCCTTGAACCAACAGAAGCCTTTGGCCTTGATGCCAATCACCTCAGGTACATCACTGATCACTTCAGGTACAAGTTTGCCAATGAGAGGCTGAAGAGAACAGCAAGGTTCTACTCATCAAATTGGAGAACATGGGCTGCTGTCAACATCCAATTCGCTTGGAGGCGCTACAGGCAGAGGACTAGAGGTCCAGTGACCCCTGTAAGGGACCATGGTGATGGTGGTGGCACCGAGCGCAGGCTCTTGCAGTATGCTGCAATGTTCATGTCAATAAGGCCACATGACCATCTTGAATGA 2154 0.5097 MPSFSSLPGWIGRLFNSHSQNNTGSNGGDSSTGSSNDATAVADESFGGAVECYACTQVGVPVFHSTSCDSCHQPQWEASAGSSLIPIQNRSRKTPAARTSPRAALSGPFGRVLDPRSKRVQVWNRALLIARGVALAIDPLFFYALSIGRGGSPCLYMDGGLAAMVTVARTCVDAVHLVHVWLQFKLAYVSRESLVVGCGKLVWDAREIASHYLRSTKGFWFDAFVILPVPQAVFWLIVPKLIREERIKIIMTIMLLIFLFQFLPKVYHSICMMRRVQKVTGYIFGTIWWGFALNLIAYFIASHVAGGCWYVLAIQRVASCLQQQCEKTRGCNLSLSCSEEVCYQFLLPAGTIGNPCGGNSTVVKKPLCLDVEGPFRYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSDWLEVIFSICIVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMKRRQLPSRLRQRVRHFERQRWAAMGGEDEMELIKDLPEGLRRDIKRYLCLDLIKKVPLFHNLDDLILDNICDRVRPLVFSKDEKIIREGDPVPRMVFIVRGRIKRNQSLSKGMVASSILEPGEFLGDELLYWCLKRPFIDRLPASSATFVCLEPTEAFGLDANHLRYITDHFRYKFANERLKRTARFYSSNWRTWAAVNIQFAWRRYRQRTRGPVTPVRDHGDGGGTERRLLQYAAMFMSIRPHDHLE* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0182 717 Pfam Ion transport protein 122 445 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dod01g0182 717 Gene3D Helix hairpin bin 453 518 - -
Dod01g0182 717 MobiDBLite consensus disorder prediction 18 39 - -
Dod01g0182 717 ProSiteProfiles cAMP/cGMP binding motif profile. 527 637 IPR000595 -
Dod01g0182 717 Gene3D Jelly Rolls 525 643 IPR014710 -
Dod01g0182 717 SUPERFAMILY cAMP-binding domain-like 454 641 IPR018490 -
Dod01g0182 717 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE 52 717 - -
Dod01g0182 717 SUPERFAMILY Voltage-gated potassium channels 114 448 - -
Dod01g0182 717 CDD CAP_ED 527 637 IPR000595 -
Dod01g0182 717 Gene3D - 157 450 - -
Dod01g0182 717 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 52 717 - -
Dod01g0182 717 SMART cnmp_10 527 653 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0182 Dod-Chr1 3066961 3073137 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0182 10 717 Ion Channels AT5G15410 75.766 0.0 1057
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0182 K05391 - gmx:100798823 1231.47