Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0179 ATGGGCTCCTATAGTTCAGAGAGAGAGAACCATGATGACGTGGTGAAAACCCTGTCCACACAAAAAGACGAAACTACCCTTTCAGCCATGGTGCTTGGTGCAACCATGGTCTTCCCTGCAGTCCTCAACGCAGCAATTGAGCTCAAACTCTTTGAGATCATTGCAAAAGAGAGCGGTGATACCGATGATGGGTTCATGTCAGCACTAGAAGTTGCTTCCAAGTTACCAACACAGCACCCTGACATGCCAAACAGGCTCGAGCGTGTGCTGTGCTTGCTTGTTAGCTACTCTCTTCTCACTATTTCCACTCGAACCAATGAGGATGGTAGTGTTGTGAGGGTTTATGGGGTGTCACCAACTGGAAGATTCTTAGTGAATAATGATGAGAATGGTGATGGCTATCTTGGTTCATTCCATTCGTTTTTGTGTCAGCCTGCATTGTCAGGAGTTTGGCTGAATTTTAAGGAAGCAATTGTTAATCCTGACATCGACCTATTCAAGAAAGTTCATGGGATACCTAAGTATGAGTACTTCGGGAAAGATCCACAAATAAACCGCGTATTTAACCAATCAATGACTGATCCATGCATGCATTTGACTCGATCGGTCCCTTGTGATTCCCGACTTAGAATGTTGCTAGATTTAGGAACAGCGCCCGATAATGGACTCTTATTTTATGACTGA 684 0.4444 MGSYSSERENHDDVVKTLSTQKDETTLSAMVLGATMVFPAVLNAAIELKLFEIIAKESGDTDDGFMSALEVASKLPTQHPDMPNRLERVLCLLVSYSLLTISTRTNEDGSVVRVYGVSPTGRFLVNNDENGDGYLGSFHSFLCQPALSGVWLNFKEAIVNPDIDLFKKVHGIPKYEYFGKDPQINRVFNQSMTDPCMHLTRSVPCDSRLRMLLDLGTAPDNGLLFYD* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0179 227 Pfam Dimerisation domain 41 94 IPR012967 GO:0046983
Dod01g0179 227 Gene3D Vaccinia Virus protein VP39 128 219 IPR029063 -
Dod01g0179 227 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 198 - -
Dod01g0179 227 SUPERFAMILY "Winged helix" DNA-binding domain 24 128 IPR036390 -
Dod01g0179 227 Gene3D - 5 124 IPR036388 -
Dod01g0179 227 PANTHER O-METHYLTRANSFERASE 1 198 IPR016461 GO:0008168
Dod01g0179 227 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 30 227 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0179 Dod-Chr1 3018300 3021354 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0179 23 194 Monolignol Biosynthesis Gene Families AT5G54160 39.205 1.47e-31 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0179 - K13066 gmx:100798295 249.595