Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0174 ATGTCCTCCACCACCACCACCACCAAATCCGATTCTGCCAAGGCGCCGCCGCAGTCGCGGCCCACCATAACCCTCCCGCCACGTCCCTCCGCTGATGCCTTCTTCTCCGGCGCCGCCGGCGCCAGCCCCGGCCCCATGACCCTAGTCTCCAGCTTCTTCTCCGACGGCGGCGGAGAGTCCGACTATCGCTCCTTCTCGCAGCTCCTCGCCGGGGCCATGGCGTCCCCGCTTGCCTTTGGCGGCGCCACCACCTTCTCGGCCCACAATCCCGGCGAGAATTCCGGGAAGGAAGAGAAACAGCAGAGCGTAGGGTTCAAGCAGAGCAGGCCCATGAACTTGGTGGTTGCTCGTTCGCCAATGTTCACTATCCCACCAGGGTTGAGCCCTTCCGGTTTTCTCAATTCGCCTGGGTTCTTTTCCCCTCAGAGCCCCTTTGGGATGTCCCACCAACAGGCTTTAGCACAGGTTACAGCTCAAGCTGTCCTAGCTCAATCTCAAATGCACATGCAAACTGATTATCAGGCATCTGCAGTAACAGCTCCTGCTGAACCTTTGGTAGAGCAACCATCTTTTACTCTAAATGAAGCTTCACAGCAGCAAGTGGTACCGTCTGTATCAGAACCTAGCAATGCTCAATTGGAAACATCAGAGCTTTCGCACAATGATAAGAAATATCAACCATCTTCTTTGGCCATTGACAAACCTGCAGATGATGGTTACAACTGGCGTAAGTATGGGCAGAAGCAGGTTAAGGGGAGTGAGTATCCACGGAGCTACTACAAGTGTACTCATCTGAATTGCCCAGTGAAGAAAAAGGTTGAGCGTGCCCCTGATGGCCACATAACTGAAATCATCTATAAAGGCCAGCATAACCATGAAAAGCCTCAGGCAAATAGGGGTATCAAAGATAATAGTGATTCAAATGGAAATGCAAGTGTTCCACCTAGGTCTGAGTCAAACTCACAAGGTTGGGTTGGAAATTTAACCAAGTTCGGTGAAAGCATACCTGATTGTCCAGTGCCTGAGAGTGACCAGACCTCCAATCAAGGGCCAACTAGGCAACCCCCTGGATCAAGCGAGAGTGAGGAACTGGGGGATGTAGATAATAGGGAAGAGGGAGATGACAGTGAGCCAAACCCTAAGAGAAGGAACACTGATCTTGGGGTTTCTGAAGTACCTCTTTCTCATAAGACTGTCACGGAACCCAAAATCATTGTGCAAACAAGAAGCGAAGTTGATCTTTTGGATGATGGCTACAGGTGGCGAAAGTATGGTCAGAAAGTGGTGAAGGGAAATCCTCATCCAAGGAGTTACTACAAATGCACTAGTGCAGGATGCAATGTGCGGAAGCATGTTGAGAGGGCTTCATCGGACCCCAAAGCTGTCATAACTACTTATGAGGGAAAACATAATCATGATGTCCCTGCTGCTAGAAACAGCAGCCACAACACTGCTGGTGGCAATTCAATGCCATTGAGACCACATGCTGTAGTGCCAGAGAAGCACCCTTTGCTTAAAGATATGGATTTTGGAAGTAACGACCAAAGACCGGTACATTTACGCTTAAAAGAAGAGCAAATCATAGTCTAA 1590 0.5019 MSSTTTTTKSDSAKAPPQSRPTITLPPRPSADAFFSGAAGASPGPMTLVSSFFSDGGGESDYRSFSQLLAGAMASPLAFGGATTFSAHNPGENSGKEEKQQSVGFKQSRPMNLVVARSPMFTIPPGLSPSGFLNSPGFFSPQSPFGMSHQQALAQVTAQAVLAQSQMHMQTDYQASAVTAPAEPLVEQPSFTLNEASQQQVVPSVSEPSNAQLETSELSHNDKKYQPSSLAIDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERAPDGHITEIIYKGQHNHEKPQANRGIKDNSDSNGNASVPPRSESNSQGWVGNLTKFGESIPDCPVPESDQTSNQGPTRQPPGSSESEELGDVDNREEGDDSEPNPKRRNTDLGVSEVPLSHKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERASSDPKAVITTYEGKHNHDVPAARNSSHNTAGGNSMPLRPHAVVPEKHPLLKDMDFGSNDQRPVHLRLKEEQIIV* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0174 529 MobiDBLite consensus disorder prediction 273 390 - -
Dod01g0174 529 SUPERFAMILY WRKY DNA-binding domain 235 295 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod01g0174 529 Pfam WRKY DNA -binding domain 237 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g0174 529 Pfam WRKY DNA -binding domain 416 472 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g0174 529 SMART WRKY_cls 236 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g0174 529 SMART WRKY_cls 415 474 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g0174 529 MobiDBLite consensus disorder prediction 86 106 - -
Dod01g0174 529 MobiDBLite consensus disorder prediction 195 241 - -
Dod01g0174 529 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 14 527 IPR044810 GO:0003700
Dod01g0174 529 MobiDBLite consensus disorder prediction 273 300 - -
Dod01g0174 529 MobiDBLite consensus disorder prediction 195 226 - -
Dod01g0174 529 MobiDBLite consensus disorder prediction 1 19 - -
Dod01g0174 529 MobiDBLite consensus disorder prediction 301 328 - -
Dod01g0174 529 ProSiteProfiles WRKY domain profile. 231 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g0174 529 PANTHER WRKY TRANSCRIPTION FACTOR 73 14 527 - -
Dod01g0174 529 MobiDBLite consensus disorder prediction 340 359 - -
Dod01g0174 529 MobiDBLite consensus disorder prediction 1 41 - -
Dod01g0174 529 Gene3D WRKY domain 400 476 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod01g0174 529 Gene3D WRKY domain 225 296 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod01g0174 529 ProSiteProfiles WRKY domain profile. 410 475 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod01g0174 529 SUPERFAMILY WRKY DNA-binding domain 407 475 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod01g0174 529 MobiDBLite consensus disorder prediction 84 106 - -
Dod01g0174 529 MobiDBLite consensus disorder prediction 471 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0174 Dod-Chr1 2987301 2992417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0174 19 527 WRKY Transcription Factor Family AT2G03340 53.558 2.07e-154 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod01g0174 WRKY 9.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0174 - - aip:107635357 883.248