Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0163 ATGGAACCAATGGAGAATGTTTATAGACCAAGAAAGGAAAACCCAATGTTCGAGTTGCCGTCCGGTTTTCGGTTTCATCCAACGGATGTAGAGCTCATAAACAATTACCTCATAGAGAAAGTTCGTGATAGTCGATTCTCTGCTTTAGCAATCGCTGATGTTGATCTCAACAAATGTGAGCCATGGGATTTGCCAGGGTTGGCCAAAATGGGTGAAACAGAGTGGTATTTTTTCTGTGTGAGAGACAGAAAATATCCAACTGGTCAACGGGCGAATAGGGCCACTTGTGCTGGCTATTGGAAGGCCACAGGCAAAGACAAGGGGATATCCGTTGGAAAAACGATAATGGGGATGAAGAAGACCTTGGTTTTCTACATTGGAAGAGCTCCAAAAGGTGAAAAAACCGATTGGATCATGCATGAGTACAGATTGGAAGGCAACCTGTTTGAGCATAATTTGGCCCATCTTGAAAGGAGTGAATGGGTTATCTGTAGGGTCTTTGAGAAGAAGAGTCCTTCTGGAAAGAAAATGCACATACCAAAGTTTGGGAAGCTCTCTTTGGAAGAGGAACCATTACCAAAAACCAGTATGGATCCTTCATTCCCAAGCGAAACAAGAACCAGTCCTAGTAAGTTATCCCAGGTGACATGCTTCTCCAATATGAATCAAGTCAATGATGGGAACAACACACATGATGACATAGTTGATAGCATGAATACTCCTATCTTGAACTATTCATCTACTTTAGGATCCTCTGATATTTCCCCTGCTGCTTCATGGGGGTTTGCCAAAGAAACAGCTACAGTCTGCAATGTCCAATCCACACAGATTGCACACCAAGTTGCGAATTCAGTGACCCCCCCAGATTATTTTGTGCCTCAAGAACCTTCCATGCCGATGACACTGATGGAAAACAATGGGTCAAGTGCAATGCAGAATCAGAAAGCAGAGTCTTCTCAAGGCAGAGACTTTGAGATTGATATCTCACCTCTGATATACAACAATGACATGTTTTGCAGCTTTGCTGGTGACCAACAGCTATCATCAGCTTCTGCAGGGCTTGTGGACATTGGCAGCATATGGAATTTCTAA 1092 0.4332 MEPMENVYRPRKENPMFELPSGFRFHPTDVELINNYLIEKVRDSRFSALAIADVDLNKCEPWDLPGLAKMGETEWYFFCVRDRKYPTGQRANRATCAGYWKATGKDKGISVGKTIMGMKKTLVFYIGRAPKGEKTDWIMHEYRLEGNLFEHNLAHLERSEWVICRVFEKKSPSGKKMHIPKFGKLSLEEEPLPKTSMDPSFPSETRTSPSKLSQVTCFSNMNQVNDGNNTHDDIVDSMNTPILNYSSTLGSSDISPAASWGFAKETATVCNVQSTQIAHQVANSVTPPDYFVPQEPSMPMTLMENNGSSAMQNQKAESSQGRDFEIDISPLIYNNDMFCSFAGDQQLSSASAGLVDIGSIWNF* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0163 363 Pfam No apical meristem (NAM) protein 20 144 IPR003441 GO:0003677|GO:0006355
Dod01g0163 363 Gene3D NAC domain 28 173 IPR036093 GO:0003677|GO:0006355
Dod01g0163 363 ProSiteProfiles NAC domain profile. 19 169 IPR003441 GO:0003677|GO:0006355
Dod01g0163 363 PANTHER ANAC079/ANAC080/ATNAC4 PROTEIN 12 356 - -
Dod01g0163 363 MobiDBLite consensus disorder prediction 188 209 - -
Dod01g0163 363 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 356 - -
Dod01g0163 363 SUPERFAMILY NAC domain 15 169 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0163 Dod-Chr1 2813804 2818157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0163 18 363 NAC Transcription Factor Family AT5G07680 44.413 2.10e-82 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod01g0163 NAM 2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0163 - - gmx:100782172 428.328