Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0138 ATGTCGGAGAAACTTGAGAATGGTTCATCCTTGAGTGTGCCTTTGCTACCTGAGTGGAAGAACCATGAGGTAGTGTATGCCACTGATGAGGAGAAAGTTATCGCCTCTCATCCTCATACCTCAAAGCCAGTGTCTTTCTTCCAAACCTGCCTCAATGGACTCAATGCAATATCAGGTGTTGGGATACTCTCAGTTCCATTTGCTCTAGCATCTGGAGGGTGGTTAAGCTTGACTCTTCTGTTTGCTATTGCCATGGCAGCCTTCTACTCAGGCCTATTGATTAAAAGATGTATGGATAAGAATTCAAGTATTAGAACCTATCCTGATATTGGTGAGCTTGCATTTGGGAAAACAGGAAGGCTAATAGTGTCAGTGTCCATGTACATGGAGCTCTATGTAGTTTCAATAGGATTCTTGATTCTGGAGGGTGATAACTTGAATGAATTGTTCCCAAACATTGAGCTTGAAGTGGCTGGTTTAGCAATTAGTGGGAAGCAATTCTTTGTGATATTGGTTGCTATTATTATCTTGCCTACTGTTTGGTTGGATGACTTGAGCCTACTTTCTTATGTATCTGCAAGTGGTGTGTTTGCTTCTGCTATTATCATCCTCTCAATATCATGGACTGCAACCATTGATGGAGTTGGCTTTCATCAAAAGGGAACTTTCCTTAATTTGAGTGGGGTCCCCACATCTGTTAGCTTGTATGCCTTTTGTTACTGTGCTCATCCAGTCTTCCCAACATTGTACAATTCCATGAGGAACAAACACCAGTTCTCTAATGTTCTACTTGTGTGCTTTATGTTAGCCACTGTTGGCTATGCATCCATGGCTATAATTGGTTACCTAATGTTTGGTCCAGAAGTTGAATCGCAGGTAACTTTGAACCTGCCACTAAACAAAGTAAGCTCAAGAGTAGCAATATATACTACCTTGGTTAATCCCATATCAAAGTATGCCTTGATGACAACACCTATTACCAATGCTTTGAAAGATTTGCTTCCAAGGAAGTACAAGAATAGAGTCACCAAGATACTGGTCAGCACTATGATGGTTGTCAGCACTGTCATTATTGCCCTGGCTGTTCCTTTATTTGGGGATCTCATGTCACTGGTTGGAGCATTTTTAAGTATCACAGCTTCTATTCTGCTTCCATGCTTATGCTACTTGAAGATTTCAGGCAACTACAGGAATTGTGGGTGTGAGACAATAACCATAGCGGCTGTTATAGTAGCAGCTGTAGTAATTGGAATATTTGGCACATACACATCACTCAAGGAAATAGTACACCATTTGTAA 1299 0.4103 MSEKLENGSSLSVPLLPEWKNHEVVYATDEEKVIASHPHTSKPVSFFQTCLNGLNAISGVGILSVPFALASGGWLSLTLLFAIAMAAFYSGLLIKRCMDKNSSIRTYPDIGELAFGKTGRLIVSVSMYMELYVVSIGFLILEGDNLNELFPNIELEVAGLAISGKQFFVILVAIIILPTVWLDDLSLLSYVSASGVFASAIIILSISWTATIDGVGFHQKGTFLNLSGVPTSVSLYAFCYCAHPVFPTLYNSMRNKHQFSNVLLVCFMLATVGYASMAIIGYLMFGPEVESQVTLNLPLNKVSSRVAIYTTLVNPISKYALMTTPITNALKDLLPRKYKNRVTKILVSTMMVVSTVIIALAVPLFGDLMSLVGAFLSITASILLPCLCYLKISGNYRNCGCETITIAAVIVAAVVIGIFGTYTSLKEIVHHL* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0138 432 PANTHER AMINO ACID TRANSPORTER AVT1J 43 429 - -
Dod01g0138 432 Pfam Transmembrane amino acid transporter protein 44 421 IPR013057 -
Dod01g0138 432 PANTHER OS05G0424000 PROTEIN-RELATED 43 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0138 Dod-Chr1 2602170 2603981 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0138 45 429 Amino Acid or Auxin Permease AAAP Family AT3G28960 60.104 1.97e-175 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0138 K15015 - gmx:100794374 677.552