Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0134 ATGGAAGGGACAACAACCCAAAAGATGTTCAGCCTCCACACTGATGCAAGTGAGCTCCAAAATCCCAGTGTTCAAAAGCAATCACCTTCTCATTCTCTTGAAAAACTTCCACAAAATTATCCTCCTAGCTTCCCCAGACAGGTATTGGCAGAGATTATAGGGACCTATCTATTGGTGTTTGTGGGAAGTGGTTCTGCTGGTCTTAGTGCAATTGATGAAAACAAGGTGTCAAAATTGGCAGCTTCACTTGCAGGAGGGTTCATAGTGACGGTGATGATCTATTCAATAGGCCACATCTCTGGGGCACATATGAATCCAGCTGTCTCCTTAGCTTTTGCCGCCGTGAGGCATTTTCCTTGGAAACAGGTCCCATTTTACATTGCAGCCCAACTCACAGGGGCCATTTCTGCTGCATACACGCTCCGAGTGCTATTAGAACCGGCATCACAGATTGGGGCAACATCACCTTCTGGATCAAACTTTCAAGCATTAGTCATGGAAATGGTGGCCACATTCACCATGGTGTTCATATCCACTGCCGTGGCCACTGACTCAAAAGCTGTTGGAGAGTTATCAGGAGTAGCAGTAGGTTCATCAGTTAGCATAGCAAGCATTGTAGCCGGACCAATATCAGGGGGATCAATGAACCCAGCAAGGACATTAGGTCCTGCAATTGCAAGTGCATCCTTCAAGGGAATTTGGGTCTATCTGGTTGGGCCAGTTACTGGGGCACTTTTAGGGGCATGGTCCTACACTGTGGTTCAGGACACAGAGAAGCCAGCTTCTGCAGTATCACTACCTTCACTTTCATCCATGCTACGCCTAAGGATTAGTGAATCTGAGCAAGTTGCCCACCACAGCTCGGTGTGA 870 0.4747 MEGTTTQKMFSLHTDASELQNPSVQKQSPSHSLEKLPQNYPPSFPRQVLAEIIGTYLLVFVGSGSAGLSAIDENKVSKLAASLAGGFIVTVMIYSIGHISGAHMNPAVSLAFAAVRHFPWKQVPFYIAAQLTGAISAAYTLRVLLEPASQIGATSPSGSNFQALVMEMVATFTMVFISTAVATDSKAVGELSGVAVGSSVSIASIVAGPISGGSMNPARTLGPAIASASFKGIWVYLVGPVTGALLGAWSYTVVQDTEKPASAVSLPSLSSMLRLRISESEQVAHHSSV* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0134 289 Pfam Major intrinsic protein 43 251 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod01g0134 289 PANTHER MAJOR INTRINSIC PROTEIN, AQUAPORIN-LIKE PROTEIN-RELATED 38 275 - -
Dod01g0134 289 PANTHER AQUAPORIN NIP2-1 38 275 IPR034294 -
Dod01g0134 289 PRINTS Major intrinsic protein family signature 166 184 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod01g0134 289 PRINTS Major intrinsic protein family signature 85 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod01g0134 289 PRINTS Major intrinsic protein family signature 234 254 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod01g0134 289 PRINTS Major intrinsic protein family signature 46 65 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod01g0134 289 PRINTS Major intrinsic protein family signature 197 219 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod01g0134 289 PRINTS Major intrinsic protein family signature 122 141 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod01g0134 289 ProSitePatterns MIP family signature. 103 111 IPR022357 -
Dod01g0134 289 Gene3D Glycerol uptake facilitator protein. 6 263 IPR023271 -
Dod01g0134 289 MobiDBLite consensus disorder prediction 1 37 - -
Dod01g0134 289 SUPERFAMILY Aquaporin-like 41 258 IPR023271 -
Dod01g0134 289 CDD MIP 46 254 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0134 Dod-Chr1 2524628 2528242 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0134 46 274 Major Intrinsic Protein MIP AT5G37820 47.619 3.03e-70 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0134 K09874 - gmx:100788071 353.214