Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0129 ATGCCGGCGCCCACCGCCACCTCGGCCGACCCTACATCCATCAAGTGTGCCGCCTGTGGCTGCCACCGCAACTTCCACCGCCGAGAGCCGGAGGACCCGCTCATCTCCTCCGGGATCGAGTTCCAGTCGCACAACCGCCACCAACCTCCGCCGCCGCCGCCGCTCCTCAACCGGAGCCCTAATTCGGCGTCCCCGCCTCCGATCTCGTCGTCCTACTACCCTCACCACCACCACCACCACCACCATCCTTCAGCGCCACACATGCTCCTTGCTCTCTCCGGAGCCGGAATCGCCGCGCCGCCGGAGAGCACCGCAGCTCCCGTCTCCGCCGCCGCCGCTGCTTCGCCCAGGAAAAGGTTCAGGACGAAGTTCAGCCAGGAGCAGAAGGAGAAGATGCATGAATTCGCTGAGAGGGTTGGGTGGAAGATGCAGAAGAGGGATGACGATTTGATTCATGAGTTTTGCAACGAGGTTGGTGTTGATCGTGGTGTTCTCAAGGTTTGGATGCACAACAACAAGAACAGCTTCGCCAAAAGAGAGAATAATCACAATAATAATAGTAATAATCATCATGGTAGTGAAGCTAATGGTGGTGGTGGTGGTAGCAGGAGCATCATGGAGGAAGATCCTAACAACAACAATGATGGTGGTGTTAATGGCAACGATGATGTCGGTGTCAATGTTGGTGCTAATGGTTCTTCTTCTTCTTCTTGA 714 0.563 MPAPTATSADPTSIKCAACGCHRNFHRREPEDPLISSGIEFQSHNRHQPPPPPPLLNRSPNSASPPPISSSYYPHHHHHHHHPSAPHMLLALSGAGIAAPPESTAAPVSAAAAASPRKRFRTKFSQEQKEKMHEFAERVGWKMQKRDDDLIHEFCNEVGVDRGVLKVWMHNNKNSFAKRENNHNNNSNNHHGSEANGGGGGSRSIMEEDPNNNNDGGVNGNDDVGVNVGANGSSSSS* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0129 237 Pfam ZF-HD protein dimerisation region 7 30 IPR006456 -
Dod01g0129 237 MobiDBLite consensus disorder prediction 46 61 - -
Dod01g0129 237 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 1 206 - -
Dod01g0129 237 MobiDBLite consensus disorder prediction 27 85 - -
Dod01g0129 237 MobiDBLite consensus disorder prediction 206 237 - -
Dod01g0129 237 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 1 29 IPR006456 -
Dod01g0129 237 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 117 174 IPR006455 -
Dod01g0129 237 MobiDBLite consensus disorder prediction 176 195 - -
Dod01g0129 237 PANTHER HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN 1 206 - -
Dod01g0129 237 MobiDBLite consensus disorder prediction 176 237 - -
Dod01g0129 237 SUPERFAMILY Homeodomain-like 112 178 IPR009057 -
Dod01g0129 237 Gene3D - 103 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0129 Dod-Chr1 2483621 2484334 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0129 14 203 ZF-HD Transcription Factor Family AT3G28920 44.495 6.31e-47 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Dod01g0129 ZF-HD_dimer 3.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0129 - - gmx:100786999 196.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g2477 02 54686878 54688265 Dod01g0129 01 2483621 2484334 PCT