Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0128 ATGAGGAAGTACGTTCTGAGGACCCACGTACCAGCAAGGAACCCAAACAATTCTCGTCCACCATCATCATCCAACATAAGAACATATGTGACCTACTTAGAGTGCCAGAGGAACCAGGCTGAGCGTATTGGAGGGATTGCTTATGATGGATGCATGGAGTTCTTGGCCAGTGGACCAGAAGGAACACCTGCTGCTCTCATATGTGCTGCTTGTCAATGCAACAGGAGCTTCCATAGGCTTGTTGTGCGCACCGAGGCCGTCAACGATCATGATGCTGCTCCTGCTTCTTCCTCCCATCCTCCTCCTCCACCACCTCCGCCTCCTGCTGCACATGGAGCCGCCACCACCACTTGA 354 0.5311 MRKYVLRTHVPARNPNNSRPPSSSNIRTYVTYLECQRNQAERIGGIAYDGCMEFLASGPEGTPAALICAACQCNRSFHRLVVRTEAVNDHDAAPASSSHPPPPPPPPPAAHGAATTT* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0128 117 MobiDBLite consensus disorder prediction 1 25 - -
Dod01g0128 117 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 21 86 - -
Dod01g0128 117 MobiDBLite consensus disorder prediction 96 111 - -
Dod01g0128 117 MobiDBLite consensus disorder prediction 11 25 - -
Dod01g0128 117 PANTHER ZF-HD HOMEOBOX PROTEIN, CYS/HIS-RICH DIMERIZATION DOMAIN-CONTAINING PROTEIN-RELATED 21 86 - -
Dod01g0128 117 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 32 81 IPR006456 -
Dod01g0128 117 MobiDBLite consensus disorder prediction 88 117 - -
Dod01g0128 117 Pfam ZF-HD protein dimerisation region 30 80 IPR006456 -
Dod01g0128 117 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 31 79 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0128 Dod-Chr1 2452120 2452473 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0128 2 98 Zinc finger-homeobox gene family AT3G28917 50.000 3.48e-21 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Dod01g0128 ZF-HD_dimer 2.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0128 - - ahf:112740680 106.686