Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0096 ATGCACACCCTTCTGTTGTTGATTTTTATCTTCTTGTGTCGTGCACCTCGGCAGCTAGCAGCAATAACCACCAACACTAACACCAACAGAAGGATCCTCCATGAACCATTTGTCCCATTGAACACCCTCCCACCCTCTGAGGCACCAAGACCATCACCGCCTTCAACTCAAAACCCCAAGCACCCATACTCCACCACTACCACCGCCACCACCACCACCACCACCACCAACGAGTCACCACCATTCTTCCCAAACTACCCCTCACCACCGCCACCCCCATCTCTTTCCAATTTCGCATCCTTCCCAGCCAACATCTCTTCCCTCGTACTCCCACACTCCCCAACGCCCACTCCCTCATCCTCAAAGCTCCTCCCACTCGCCCTCTCCGCCGTCGCCCTCGCCCTTCTCGCTGCCGCCGTCTCCGCTTTCCTCTACTTCCGCCGCCGACGCCGCAACCACCGCAGCGGTTCTGCTGGCCACAAGGATTTTCGGTCCGACGGCGGTCCCCGGCTGTTACCGCGCAATGCAGAGTCCGCTGCCAAGCTCCGGCACGCTCCCTCCGCTGCCAGCTCCGAGTTCCTCTACCTCGGCACTGTCGTGGATTCCCGCCGGATTGAAGGCAGTGATGACGGTGCTGTTGACATCGACGGCGGAGATTTGGTTAGCCGGAAAATGGAGTCGCCAGAGCTCCGGCCTCTTCCGCCTCTGGCGAGACAGGTTTTGGCACCGCCGCCGGTGACGGAGGCTAAGGCGGAAGAGGAGGAGGAGGAGGAAGAGGAAGAGTTTTACTCGCCGAGAGGTTCGTCGTTGGGAGGGCGCGAGAGCTCCGGCGGAACCGGATCGGGTTCCCGGCGGGCTTTGTCGGCCGTCGCCGGCGATAATTTCACCGAAAGGATCGACGAATTGAGCACCAGTTCGTTGTCTTCCTCGAATTGCGGCTCGCCGGAACGGTCTCACTCAATCAGCCTCTCGCCGCCGGCGAGTTCGAGTCCGCTGAGGACACAACCTACACCACCGCAACCACAGATTGCGACACCGGTTTTATCACCTGCATCATCACCAATTCACAACCAACACGTGCCTTCTTCTTGTTCTTCTTATTCGTCTTCGTTGTGTTCTTCATTATGCTCAACACCTGAGAGAGCTTTTGTTCATGAAGAAGAAGAAGATACTAATACTGTTGCTACTCACTCTCCTTCGCTGTCACCACTCTTCTTGCCACCCAATTTGGAGAAAACCACCCTTCATGAAGATGATGAGGCTACTGTAAATTTGGACACTGATCATCATACATGTGCACCATCATCACCACCACCACAAGAGACGGTTTTAGAGACAAATGAAGCTGCATCAGCATTAGCATTACCGAGGGTATCTAATGCTTCCAGTGGAAGCAGAAAGTTTCTGCCTTCATCACCATCATCATCAACTTCAGCTTTCTCTCTGCCCTCCTCGCCGGAGAAGGCAGCGAGTCATATCGGTTTTGATCAGTCTCCGAGGATGTCGAGTGTCTCAGACCGGTTTAGGCAACCTGATCTGTCATCATTGCCATTGTCACCAACCCTGCTTTCATCGCCGGAAATAGAAAGAGGATTGAAAAGCACTTCGAATCCAAACGAGCCAGAAGCAGTTGCTAATGGCGTTTCACAGAGGAAACATTGGGAGATTCCGGTATTGTCGACGACAACAGCAACACCCTTAGGAACTGTTGTTGGCAATGTTTTGGATCAAATTGGAGCTGTTCCTGTTGCTCATCCACCACCACCACCACCTGCGTCTCAGAGGAAACAATGGGAGATTCCAGCTCTCTCAACACCAATTGCTCCATCATCAGCAGTGCCGCCTCCTCCTCCTCCTCCTCCACCGGCTCCTCCGTTGCAGCGGCAGCGGAAGCAATGGGAGGTTCCAGCTCCCACAACACCTGTTGGCCAATCCGTTTCGAGGCCCCCGGCGTTGATACCTCCTTCTAGGCCGTTTGTGTTACAGACCCCAGCAACAAAGGTTTCCCCAGTTGAGCTACCACCGAGTTCTCAGAGTTTGGGTGCGGCGGAAGAGGCTGCAAAACCCAAGTTGAAGCCTTTGCATTGGGACAAAGTGAGGGCAAGCTCTGATCGTGAAATGGTGTGGGATCAGTTAAAGTCTAGCTCTTTCAAATTGAATGAGGAAATGATTGAGACATTGTTTGTAGTGAACACACCAAACCCAAAACCCAAGGATGCTACTCCCCGCTCGGTTCTTCCCCCACCAAGTCAGGAGGAGAGAGTACTTGATCCTAAAAAGTCCCAAAATATTGCAATCTTACTGAGAGCCCTTAATGTCACCATAGAAGAAGTGTGTGAAGCACTTTTAGAAGGTAGTGTTGATACACTTGGAGCAGAACTACTTGAATGCTTGTTAAAAATGGCACCAAGTAAGGAAGAAGAACGTAAGTTAAAGGAACACAAAGAAGACTCACCAACCAAGCTTGGTCCAGCTGAGAAATTTTTGAAGGCAGTACTGGGTGTACCTTTTGCATTTAAAAGGGTGGAAGCAATGCTTTACATGGGCAATTTTGACTCTGAAGTGGAGTATCTTAGGAAATCCTTTCAAACTCTAGAGGCTGCCTGTGAAGAGCTGCGGAGCAGTAGAATGTTCTTGAAGCTTTTAGAGGCTGTGCTTAAAACTGGGAACCGCATGAATGTGGGGACAAATCGCGGTGATGCACAGGCCTTCAAACTTGATACACTTCTCAAGCTGGCTGATGTCAAAGGCGCAGATGGGAAAACAACACTACTGCATTTTGTTGTGCAGGAAATTATTAGAACCGAGGGTGCTCGTCTTTCTGGTACTAACCAAACTCCGAACTCTACTTTGAGTGAAGACGTCACATGTAGGAGGCTTGGCCTGCAAGTAGTATCTAGTTTGAGTTCAGACCTAGCCAGTGTGAAGAAGGCTGCCACTATGGATTCTGAGGTTCTCAGCAGTGATGCCTCTAAACTTTCCAAAGGAATTGCAAACATTGCAGAGGTTGTACAATTAAATGAAATGGCAGGATCAGATGAGAGCAGTCAGAAGTTTACAGACTCAATGAACAAATTCATTAGAATGGCAGAGGAGGAGATTCTGAAGATTCAAGCCCAAGAAAGCGTTGCTTTGTCCCTAGTGAAGGAGATCACCGAGTATTTTCATGGGGACTTGGCAAAAGAAGAAGCACATCCATTCAGAATTTTCATGGTTGTAAGAGACTTCTTAGCAGTTCTTGACCGTGTCTGCAAAGAAGTTGGCATGATAAATGAGCGAACTATGGTCAGTTCGGCACACAAATTCCCTGTTCCAGTTAATCCAATGCTTCCACAACCGCTCCCTGGATTGCATGATAGGCGACAGCACAATGACTCTTCAGATGATGACGCTCCATCGCCTTAG 3405 0.5054 MHTLLLLIFIFLCRAPRQLAAITTNTNTNRRILHEPFVPLNTLPPSEAPRPSPPSTQNPKHPYSTTTTATTTTTTTNESPPFFPNYPSPPPPPSLSNFASFPANISSLVLPHSPTPTPSSSKLLPLALSAVALALLAAAVSAFLYFRRRRRNHRSGSAGHKDFRSDGGPRLLPRNAESAAKLRHAPSAASSEFLYLGTVVDSRRIEGSDDGAVDIDGGDLVSRKMESPELRPLPPLARQVLAPPPVTEAKAEEEEEEEEEEFYSPRGSSLGGRESSGGTGSGSRRALSAVAGDNFTERIDELSTSSLSSSNCGSPERSHSISLSPPASSSPLRTQPTPPQPQIATPVLSPASSPIHNQHVPSSCSSYSSSLCSSLCSTPERAFVHEEEEDTNTVATHSPSLSPLFLPPNLEKTTLHEDDEATVNLDTDHHTCAPSSPPPQETVLETNEAASALALPRVSNASSGSRKFLPSSPSSSTSAFSLPSSPEKAASHIGFDQSPRMSSVSDRFRQPDLSSLPLSPTLLSSPEIERGLKSTSNPNEPEAVANGVSQRKHWEIPVLSTTTATPLGTVVGNVLDQIGAVPVAHPPPPPPASQRKQWEIPALSTPIAPSSAVPPPPPPPPPAPPLQRQRKQWEVPAPTTPVGQSVSRPPALIPPSRPFVLQTPATKVSPVELPPSSQSLGAAEEAAKPKLKPLHWDKVRASSDREMVWDQLKSSSFKLNEEMIETLFVVNTPNPKPKDATPRSVLPPPSQEERVLDPKKSQNIAILLRALNVTIEEVCEALLEGSVDTLGAELLECLLKMAPSKEEERKLKEHKEDSPTKLGPAEKFLKAVLGVPFAFKRVEAMLYMGNFDSEVEYLRKSFQTLEAACEELRSSRMFLKLLEAVLKTGNRMNVGTNRGDAQAFKLDTLLKLADVKGADGKTTLLHFVVQEIIRTEGARLSGTNQTPNSTLSEDVTCRRLGLQVVSSLSSDLASVKKAATMDSEVLSSDASKLSKGIANIAEVVQLNEMAGSDESSQKFTDSMNKFIRMAEEEILKIQAQESVALSLVKEITEYFHGDLAKEEAHPFRIFMVVRDFLAVLDRVCKEVGMINERTMVSSAHKFPVPVNPMLPQPLPGLHDRRQHNDSSDDDAPSP* 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0096 1134 SMART it6_source 681 1095 IPR015425 -
Dod01g0096 1134 MobiDBLite consensus disorder prediction 36 89 - -
Dod01g0096 1134 Gene3D Formin, FH2 domain 682 1089 IPR042201 -
Dod01g0096 1134 MobiDBLite consensus disorder prediction 608 627 - -
Dod01g0096 1134 MobiDBLite consensus disorder prediction 1106 1134 - -
Dod01g0096 1134 MobiDBLite consensus disorder prediction 302 330 - -
Dod01g0096 1134 PANTHER FORMIN-LIKE PROTEIN 1 9 1134 - -
Dod01g0096 1134 MobiDBLite consensus disorder prediction 331 345 - -
Dod01g0096 1134 MobiDBLite consensus disorder prediction 302 552 - -
Dod01g0096 1134 MobiDBLite consensus disorder prediction 346 377 - -
Dod01g0096 1134 MobiDBLite consensus disorder prediction 731 754 - -
Dod01g0096 1134 ProSiteProfiles Formin homology-2 (FH2) domain profile. 681 1106 IPR015425 -
Dod01g0096 1134 MobiDBLite consensus disorder prediction 42 58 - -
Dod01g0096 1134 MobiDBLite consensus disorder prediction 581 651 - -
Dod01g0096 1134 MobiDBLite consensus disorder prediction 227 287 - -
Dod01g0096 1134 MobiDBLite consensus disorder prediction 496 544 - -
Dod01g0096 1134 SUPERFAMILY Formin homology 2 domain (FH2 domain) 615 1092 - -
Dod01g0096 1134 PANTHER FORMIN-RELATED 9 1134 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Dod01g0096 1134 Pfam Formin Homology 2 Domain 685 1080 IPR015425 -
Dod01g0096 1134 MobiDBLite consensus disorder prediction 428 447 - -
Dod01g0096 1134 MobiDBLite consensus disorder prediction 456 485 - -
Dod01g0096 1134 MobiDBLite consensus disorder prediction 269 283 - -
Dod01g0096 1134 MobiDBLite consensus disorder prediction 412 426 - -
Dod01g0096 1134 MobiDBLite consensus disorder prediction 59 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0096 Dod-Chr1 1790133 1795661 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0096 633 1122 FH2 protein (formin) Gene Family AT3G25500 73.333 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0096 - - gmx:100800333 1079.7