Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0091 ATGGCCGGCATAGACTTGGGTTCAGCATCACACTTTGTTCATCACCTTCAACGCCCTGACCTTGAAGATGATGATAACCAAGACCAAGATGGAAACAACACCAGCAACGAACATGAAGGGCTTGACCTTGTTTCACCAAATCAAGGTCCCGGTGATGTTGTTGCTCGCAGGCCAAGGGGAAGACCACCAGGTTCCAAGAACAAGCCAAAGCCACCAGTGATCATCACAAGGGAGAGTGCAAACACCCTTAGGGCTCACATCCTTGAAGTTAGTAGTGGTTGTGACGTCTTTGATTCTGTGGCCACCTATGCAAGGAAGCGCCAAAGAGGGATCTGTGTCCTCAGCGGCAGTGGAACTGTCACAAACGTCACGCTCCGGCAGCCGGCAGCTGCCGGAGCAGTCGTGACGCTCCACGGAAGGTTCGAGATACTTTCCCTCTCGGGGTCCTTCTTGCCACCCCCGGCTCCACCGGGTGCCACTAGTTTGACTGTGTTCCTTGGTGGGGGTCAAGGTCAGGTTGTTGGAGGTAATGTTGTTGGCCCTTTGGTGGCTTCTGGGCCTGTTATTGTCATTGCCTCATCATTCACTAATGTGGCCTATGAGAGGTTGCCCTTGGATGAGGATGAGCCTCTTCAGATGCAGCAAGGGCAATCGTCTGCTGCTGCCGGCGGCGGTGGTGGTGGCGGTGTTAATAGTTCCTTTCCTGACCCTTCTTCCGGGCTACCATTCTTCAATCTGCCCCTTAACATGCCTCAGTTGCCTGTTGATGGTTGGGCTGGGAACTCTAGTGGTGGAAGGCAATCTTTCTGA 810 0.5358 MAGIDLGSASHFVHHLQRPDLEDDDNQDQDGNNTSNEHEGLDLVSPNQGPGDVVARRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVSSGCDVFDSVATYARKRQRGICVLSGSGTVTNVTLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTVFLGGGQGQVVGGNVVGPLVASGPVIVIASSFTNVAYERLPLDEDEPLQMQQGQSSAAAGGGGGGGVNSSFPDPSSGLPFFNLPLNMPQLPVDGWAGNSSGGRQSF* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0091 269 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 269 - -
Dod01g0091 269 MobiDBLite consensus disorder prediction 210 245 - -
Dod01g0091 269 CDD DUF296 84 159 IPR005175 -
Dod01g0091 269 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 269 IPR014476 GO:0003680
Dod01g0091 269 Pfam Plants and Prokaryotes Conserved (PCC) domain 84 197 IPR005175 -
Dod01g0091 269 ProSiteProfiles PPC domain profile profile. 80 217 IPR005175 -
Dod01g0091 269 SUPERFAMILY AF0104/ALDC/Ptd012-like 80 211 - -
Dod01g0091 269 MobiDBLite consensus disorder prediction 15 74 - -
Dod01g0091 269 Gene3D - 83 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0091 Dod-Chr1 1682648 1684029 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0091 1 269 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 59.732 9.74e-99 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0091 - - vra:106758954 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0091 01 1682648 1684029 Dod01g0091 01 1682648 1684029 ECH