Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0089 ATGTTATCGGAGTTGATGAACATTTTGAGGGCCTGCTTTCGGCCAAGCTCAGATCGTGGTGGTTCAGATGCTGGAGGTAAGCAGGATGGACTCTTGTGGTACAAGGACTCGGGCCAGCAATTGCATGGTGAGTTTTCAATGGCTGTGGTCCAAGCCAACAACTTGCTGGAGGATCAGAGCTATATCGAATCAGGCAGTTTAAGCTTGAGTGAATCTGGCCCTTTTGGCACCTTTGTTGGTGTCTATGATGGGCATGGAGGGCCCGAGACATCGCGATATATCAATAATCATCTGGTTCACCATCTCAAGCGGTTTACTGCAGAGCAACAATCAATGTCAGTGGATGTTATTCGCAAGGCAATCCAAGCAACAGAAGAGGGATTTACATCACTTGTTGCTGAACAGTGGCCAATGAATCCACAAATTGCAGCTGTTGGATCGTGCTGTCTTGTTAGTGTTATATGTAATGGAACCCTGTATGTGGCAAATCTTGGTGATTCCCGGGCTGTTATGGGAAGAGCAGTCAAGGCAACTGGGGAGGTTTTAGCAGTACAATTGTCATCAGAGCACAATGCATCAATAGAATCTGTAAGACATGAGCTGCAATCATCGCACCCAGATGATCCACAGATTGTTGTTCTGAAGCATAACGTATGGCGTGTGAAGGGCCTTATCCAAGTTTCTAGATCTATTGGTGATGTCTATCTAAAAAAGGCTGAGTTCAATAGAGAACCTCTATATGCAAAGTTTCGGCTTCGTGAGCCATTTAAGAAGCCAATATTGAGCTCAGAACCATCGATATCTGTACATCAGTTGCAGCCACAAGATCAGTTTATTGTATTTGCATCTGATGGGCTCTGGGAGCACCTTAGCAATCAAGAAGCAGTTGATATAGTTCAAAATAATCCCCGTTGTGTAAGTTATATATTTAAATACTGTTATACTAGATATTGTCTTACTGTCTTCTCCAAGATTAAAATAAATGAATTATCACTATTTTATACTGCAAACTCAGAACTGGACGTGGAATTTTTGCTGTTCTGGTTTGTCCTGAGTACTTCTATTCAAATGAAATTGTTAGACTGTTGA 1089 0.4233 MLSELMNILRACFRPSSDRGGSDAGGKQDGLLWYKDSGQQLHGEFSMAVVQANNLLEDQSYIESGSLSLSESGPFGTFVGVYDGHGGPETSRYINNHLVHHLKRFTAEQQSMSVDVIRKAIQATEEGFTSLVAEQWPMNPQIAAVGSCCLVSVICNGTLYVANLGDSRAVMGRAVKATGEVLAVQLSSEHNASIESVRHELQSSHPDDPQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYAKFRLREPFKKPILSSEPSISVHQLQPQDQFIVFASDGLWEHLSNQEAVDIVQNNPRCVSYIFKYCYTRYCLTVFSKIKINELSLFYTANSELDVEFLLFWFVLSTSIQMKLLDC* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0089 362 SUPERFAMILY PP2C-like 53 302 IPR036457 -
Dod01g0089 362 PANTHER ALPHABET, ISOFORM E-RELATED 6 305 - -
Dod01g0089 362 CDD PP2Cc 45 304 IPR001932 -
Dod01g0089 362 SMART PP2C_4 38 335 IPR001932 -
Dod01g0089 362 ProSiteProfiles PPM-type phosphatase domain profile. 41 362 IPR001932 -
Dod01g0089 362 ProSitePatterns PPM-type phosphatase domain signature. 78 86 IPR000222 GO:0043169
Dod01g0089 362 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 6 305 - -
Dod01g0089 362 Pfam Protein phosphatase 2C 77 302 IPR001932 -
Dod01g0089 362 Gene3D - 33 317 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0089 Dod-Chr1 1628166 1634174 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0089 1 304 PP2C-type Phosphatase Gene Family AT4G38520 74.593 8.16e-174 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0089 - K01102 gmx:100794801 525.783