Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0084 ATGTCTTCTTCTTCTCTTTCTCTGTCTTCTCTGTCTTCCTCTACAAATGATCACTCCTCCTCCTCCTCCAAGTCCAAGAATGCTGCTGCTGCTGGTGCTGCACCCTCTGCTGTGCCTGTGCCTGCGGCACTCCCCATCAGGTCCTCGGCTCCTCGCAGCCTTCCCCCGCCTCGCTGGACCCCTGAAGAAACCACAGCCCTCATCCATGCCTATCGTGACAAGTGGTACGCCCTTGGCCGCGGCAACCTCAGGGCCAGCCACTGGCAAGAGATTGCTGATGAAGTTGCACTCATGGGGGCCTCCATCAGCGCCGCAACTCGTCCCAAGAATGCCCTCCAGTGCCGTCACAAGATGGAGAAGCTTCGCAAGCGCTACCACCTGGAGGCCCAGCGTGCCCGATCCAATGCCTCAACCTCACGCTTCAACCCCTTGTCATGGGTCCACTTCAAATCCATGGACTCCATGGAGAAGGGTCTTCCCAACCCAAGGAAGAATCTCGGCCTCCCGCATCTTGAAGAACGACAAGCTGACAACAATCAACAGAACTTGTACGAAAAATTCATTAAGATTAATGCTGCTGCTGCTGCTGCTGGTGGGTCTGGCAGCAAGGTGGCTAAGACTGGGGATAAGAGACTCAGAGAACGTCCCACATACTCAAGCTTTGCGCGTGGTGGTGGTGCAGCAAGGCCAGTTCATGAGTTGATTGTGAAAGAGAGAAGCGGCGGGTCGAGGGAGAGGGAGAGAGAGCCAGTTAATGAGTTGGCGAATGCAATCAAGTTGTTTGGAGAGAGATATGTGAGGATGGAGCAAAAGAAAATGGAGGCGGCGAGGGAGATTGAGACAATGCGAATGGAGATGGAAGCTAAGCGCACTAAGCTGTTTCTGGAGTCACAGGAACGGATTGTGGAGGCCTTTGCAAAGGCCATTTCTAAGAACAATAAGAAGGAGGAGGAGGACAAGAAGAAGAATGTAACTATTTAA 981 0.5321 MSSSSLSLSSLSSSTNDHSSSSSKSKNAAAAGAAPSAVPVPAALPIRSSAPRSLPPPRWTPEETTALIHAYRDKWYALGRGNLRASHWQEIADEVALMGASISAATRPKNALQCRHKMEKLRKRYHLEAQRARSNASTSRFNPLSWVHFKSMDSMEKGLPNPRKNLGLPHLEERQADNNQQNLYEKFIKINAAAAAAGGSGSKVAKTGDKRLRERPTYSSFARGGGAARPVHELIVKERSGGSREREREPVNELANAIKLFGERYVRMEQKKMEAAREIETMRMEMEAKRTKLFLESQERIVEAFAKAISKNNKKEEEDKKKNVTI* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0084 326 SMART 118neu2 66 160 IPR006578 -
Dod01g0084 326 Coils Coil 265 292 - -
Dod01g0084 326 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 31 317 IPR044823 -
Dod01g0084 326 Gene3D - 59 126 - -
Dod01g0084 326 PANTHER TRANSCRIPTION FACTOR 31 317 - -
Dod01g0084 326 Pfam Myb/SANT-like DNA-binding domain 57 155 IPR044822 -
Dod01g0084 326 MobiDBLite consensus disorder prediction 1 60 - -
Dod01g0084 326 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0084 Dod-Chr1 1497354 1498334 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0084 59 155 Trihelix Transcription Factor Family AT3G14180 29.897 7.61e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dod01g0084 Myb_DNA-bind_4 3.7e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0084 - - cam:101501151 236.498