Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0063 ATGAAAATGGTCACATCATTTTTCATAGCACCACAATATATTATATTTTTTAACAATATGTTTGTTTCATGTTATTACGGCAAGTATCAATTCAGTAATAATAATCCGTATTTCCATTTTTTCCTGGATACAGAACTTGCCCAAACTATGGAAGTGAATGAGAAGTGTGATGTTTATAGTTTTGGAGTACTTGCTTTGGAAATAATTATGGGAAAGCACCCGGGTGATCTCATTTCATCCTTTATGTCATCATCTACGGCGTCATTGGCTAATGATTTGCTAATGATTGATATTTTAGACCAAAGGCCTCCTCAACCTACGAATTCAATAGCTGAAGAGGTGGTCTTGATTACAAGATTGGCATTTTCTTGCTTGAGAACAAAGCCACGTTATAGGCCAACAATGGATCAAGTGTCTAAAGCCTTTGGGATTGGAAGATCACCATTAGTGGTTGAGTTGCCCTTGATTAGACTTGGACAACTCCAATAA 489 0.364 MKMVTSFFIAPQYIIFFNNMFVSCYYGKYQFSNNNPYFHFFLDTELAQTMEVNEKCDVYSFGVLALEIIMGKHPGDLISSFMSSSTASLANDLLMIDILDQRPPQPTNSIAEEVVLITRLAFSCLRTKPRYRPTMDQVSKAFGIGRSPLVVELPLIRLGQLQ* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0063 162 ProSiteProfiles Protein kinase domain profile. 1 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0063 162 Pfam Protein tyrosine and serine/threonine kinase 36 140 IPR001245 GO:0004672|GO:0006468
Dod01g0063 162 Gene3D Transferase(Phosphotransferase) domain 1 17 144 - -
Dod01g0063 162 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 44 161 - -
Dod01g0063 162 SUPERFAMILY Protein kinase-like (PK-like) 36 142 IPR011009 -
Dod01g0063 162 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 44 161 - -
Dod01g0063 162 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0063 Dod-Chr1 1302109 1303065 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0063 41 139 Receptor kinase-like Gene Family AT1G16150 33.654 8.17e-12 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod01g0063 PK_Tyr_Ser-Thr 1.2e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0063 - - gmx:100527193 166.007