Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0061 ATGGTAAGGGAATGTACTCTAACCATGCAAAATTCCAAACTTAGCCCTGCTATAATATCCATTCCTGCGTCATCCATCGTGAAGAGAGAAGCATTCTCTGCCTTCATCTTCAACCTCTCTTCCATTTTGAGGCCTCCGCCGCGAGATTTCTGCCACCATCGTAAGAATGGACCCAAGGATCCAAAGGCTCTCTTTGGATTTGAATTCTCGCTTCTAAGATTGGTGTGTGCGTGGTTTGAGGTCATAAGGGCAGTGATGAATCTTGATGAATCTGGAGTTGATGAATCTTCTTCCCAATTGCATCAGCAGCAGCAGATAGATTCTAGACAGAGTACTCATTATGGTGAAGTGCTCCCTGAGACAGTTGGGCAACCTGATTGCGAGGGACATGCAAGTATGGATCAACATCTCCTCTCTTCACCACCACAAGTTGCTTCTTTGGCATCTGCTGCTCCGACAATTGCCACTGAAAACAGTGAAGCAAGTGCTCTCTTAAAGTGGAAAGCCAGCCTTGACAACCACGCTGTGTTGTCATCCTGGGCAGAGTTTGGCCAGACTATGGAAGTGACTGAGAAGTGTGATGTTTATAGCTTTGGAGTACTTTGTTTGGAGATCCTTGTGGGAAAGCATCCAGCAGATCTCATCATTTCATTGTTGTCATCATCAACAGCATCAATGACTTACAATTTGCGATTGGTTGATGTTATAGACCAAAGGCCTCCTCATCCTGAGGATTCAGGTGTTGTGGGGATCATCTTGATTGCAAAGTTGGCACTTAGTTGCTTGAGTCAAAGTCCACATTCTCGCCCAACCATGGATCAAATATCTAAAGAGCTCATGATGGGAAAGTCACCTCTGGCAGAACAGTTTTCAATGATCAGGATTGGACAGCTCCATTGA 900 0.4511 MVRECTLTMQNSKLSPAIISIPASSIVKREAFSAFIFNLSSILRPPPRDFCHHRKNGPKDPKALFGFEFSLLRLVCAWFEVIRAVMNLDESGVDESSSQLHQQQQIDSRQSTHYGEVLPETVGQPDCEGHASMDQHLLSSPPQVASLASAAPTIATENSEASALLKWKASLDNHAVLSSWAEFGQTMEVTEKCDVYSFGVLCLEILVGKHPADLIISLLSSSTASMTYNLRLVDVIDQRPPHPEDSGVVGIILIAKLALSCLSQSPHSRPTMDQISKELMMGKSPLAEQFSMIRIGQLH* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0061 299 Gene3D Transferase(Phosphotransferase) domain 1 129 291 - -
Dod01g0061 299 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 182 298 - -
Dod01g0061 299 Pfam Leucine rich repeat N-terminal domain 158 180 IPR013210 -
Dod01g0061 299 Pfam Protein tyrosine and serine/threonine kinase 182 279 IPR001245 GO:0004672|GO:0006468
Dod01g0061 299 PANTHER LRR RECEPTOR-LIKE KINASE 182 298 - -
Dod01g0061 299 SUPERFAMILY Protein kinase-like (PK-like) 184 282 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0061 Dod-Chr1 1184309 1194468 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0061 185 286 Receptor kinase-like Gene Family AT3G28040 37.143 1.41e-11 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod01g0061 PK_Tyr_Ser-Thr 7.9e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0061 - - gmx:100815688 172.17