Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0060 ATGGGCAGCTGCAGTTTTTACCTTCATCTTGTTGTTACATCGTGTCTTCTTTTCACTTTCTTGCCGGAAGCTGTTCATGGCATCAAAAAGGTTTACATTGTATACTTGGGAGCACATTCTCATGGTCCAAGCCCTACATCTGTTGACCTTGAAGCCGCCACATATTTTCATTATAATTTACTAGCCTCAGTTTTGGGAAGCCATGAGAAAGCCAAAGAAGCCACTGTTTACTCATATAAGAGGCACATCAATGGCTTCGCCGCGCTACTTGAAGAAGAAGAAGCAGCAGATTTAGCAAAAAACCCAACCGTGGTGTCTGTGTTCGTGACCAAAAAGCTCAAACTGCAAACAACCCGATCGTGGGAATTTCTTGGAATAAACAGCAATGGACAGAATTCAGCCTGGGAAAAGGGTAGATTTGGTGAAAATACAATAATCGCTAACATTGACACAGGTGTTTGGCCAGAATCCGAGAGCTTCAGTGACAACGGATATGGCCCCATCCCATCAAAATGGCGCGGGGGTAATGGCGCCAGTCTTTTCATTACTTTGCCACCTAATCAGGCGCTCCCTGTGATCCTTTCTACTGATGCTAGACGTGCTAATGCATCGATTCAAGATGCTCAACTTTGTAGGCCTGGAACACTTGACCCAGCAAAAGCAAGAGGCAAAATAGTGGCCTGCCTTAGAGAAGGAGAAATAAAATCAGTTGCTGAGGGCCTGGAAGCCCAAACCGCAGGTGCAATGGGAATGCTCATTGGTAATCAAAGGCAAAATGGAAGAACGCTTACTGCTGAGCCTCATGTTTTTTCAAGTGTGAGCCATCTAAACGGTGAAGGAGGAGGAGGAAAACCTCCTGCATATCCTGACATAACAGCCGCCACTGATCCCACTATAAATTCGTCTATTACAGTAAGGTTGTCCTCTGCAGAAACAGTCTATGGAATTAAGCCAGCTCCAGTCATGGCTTCATTCTCCTCTAGAGGACCCAGTTTGATTCAGCCATCAATACTCAAGCCCGATGTAACTGCGCCAGGAGTGAACATACTTGCTGCCTATTCATTAGGCGCAACTGCATCTACCCTACTGCAAGATCCTCGTCGAGGGTTTCCATTTAATATGCTGCAAGGAACTTCCATGTCCTGCCCTCATGTTGCTGGCATTGCTGGACTTCTCAAAACACTCCATCCTGATTGGAGTCCTGCAGCTATTAAATCTGCAATCATGACCACTGCAATGCTAGCTGTGTTTGTTTCAGTGGATGATTAA 1269 0.4563 MGSCSFYLHLVVTSCLLFTFLPEAVHGIKKVYIVYLGAHSHGPSPTSVDLEAATYFHYNLLASVLGSHEKAKEATVYSYKRHINGFAALLEEEEAADLAKNPTVVSVFVTKKLKLQTTRSWEFLGINSNGQNSAWEKGRFGENTIIANIDTGVWPESESFSDNGYGPIPSKWRGGNGASLFITLPPNQALPVILSTDARRANASIQDAQLCRPGTLDPAKARGKIVACLREGEIKSVAEGLEAQTAGAMGMLIGNQRQNGRTLTAEPHVFSSVSHLNGEGGGGKPPAYPDITAATDPTINSSITVRLSSAETVYGIKPAPVMASFSSRGPSLIQPSILKPDVTAPGVNILAAYSLGATASTLLQDPRRGFPFNMLQGTSMSCPHVAGIAGLLKTLHPDWSPAAIKSAIMTTAMLAVFVSVDD* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0060 422 PRINTS Subtilisin serine protease family (S8) signature 376 392 IPR015500 -
Dod01g0060 422 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Dod01g0060 422 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 175 IPR045051 -
Dod01g0060 422 Pfam Subtilase family 310 412 IPR000209 GO:0006508|GO:0008236
Dod01g0060 422 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 178 413 - -
Dod01g0060 422 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 20 175 - -
Dod01g0060 422 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 178 413 IPR045051 -
Dod01g0060 422 Gene3D - 185 314 - -
Dod01g0060 422 Gene3D Peptidase S8/S53 domain 315 413 IPR036852 GO:0004252|GO:0006508
Dod01g0060 422 Gene3D Peptidase S8/S53 domain 144 174 IPR036852 GO:0004252|GO:0006508
Dod01g0060 422 Pfam Peptidase inhibitor I9 31 113 IPR010259 -
Dod01g0060 422 ProSitePatterns Serine proteases, subtilase family, serine active site. 377 387 IPR023828 -
Dod01g0060 422 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 116 IPR037045 -
Dod01g0060 422 ProSiteProfiles Serine proteases, subtilase domain profile. 120 422 - -
Dod01g0060 422 SUPERFAMILY Subtilisin-like 127 414 IPR036852 GO:0004252|GO:0006508
Dod01g0060 422 SUPERFAMILY Subtilisin-like 22 166 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0060 Dod-Chr1 1114760 1123508 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0060 184 414 Subtilisin-like Serine Gene Family AT2G04160 47.414 8.87e-56 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0060 - - ahf:112795608 341.273