Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0058 ATGTCTGAAACCATTGAGTCCATCAAGATTCTAGCATGCTGGCGGATTCTCTTCATATTCCTCCTTTGTGTTCTCCTAAAACTCTTCTCACCACCACATGTTACTTCTTTGGCATCTTCTGCTGCCACAGTTATAACTGAAAACAAAGAAGCAAGTGCTCTCTTAAAGTGGAAAGCCAGCCTTAACAACCACACTGTGTTGTCATCCTGGGCAGAGTTTGCCCAGACTATGGAAGTGACTGAGAAGTGTGATGTTTACAGCTTTGGAGTACTTTGTTTGGAGATCCTCATGGGAAAGCATCCAGCAGATCTCATCACTTCATTGTTGTCATCATCAACAGCATCAATGACTTACAATTTGCTATTGGTTGATGTTTTAGACCAAAGGCCTCCTCATCCTGAGGATCCAGCTGCTGGGCGTATCATCTTGATTGCAAAGTTGGCACTTGGTTGCTTGAGTCAAAGTCCACATTCTCGCCCAACCATGGATCAAGTATCTAAAGAGCTTATGATGGGAAAGTCACCTTTGGCAGAACATTGCGCAGAGTCAGAGCACGGATATGCAAGAACAAATCAAGGTCCAAGTGATGTGGAGAAATCTGATCATTGGACACAGCCAAAAATGCCTCCAAACAATCCATATCGACATACACAATATGATAGCCAAGTATCCAAACCAGGAAAGACTATGCCAAACAGCTTCAAGCTCCACATGAAGGATTCTCATCTCACGAACTGA 738 0.435 MSETIESIKILACWRILFIFLLCVLLKLFSPPHVTSLASSAATVITENKEASALLKWKASLNNHTVLSSWAEFAQTMEVTEKCDVYSFGVLCLEILMGKHPADLITSLLSSSTASMTYNLLLVDVLDQRPPHPEDPAAGRIILIAKLALGCLSQSPHSRPTMDQVSKELMMGKSPLAEHCAESEHGYARTNQGPSDVEKSDHWTQPKMPPNNPYRHTQYDSQVSKPGKTMPNSFKLHMKDSHLTN* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0058 245 Pfam Protein tyrosine and serine/threonine kinase 72 169 IPR001245 GO:0004672|GO:0006468
Dod01g0058 245 MobiDBLite consensus disorder prediction 181 245 - -
Dod01g0058 245 MobiDBLite consensus disorder prediction 188 229 - -
Dod01g0058 245 Pfam Leucine rich repeat N-terminal domain 48 70 IPR013210 -
Dod01g0058 245 PANTHER LRR RECEPTOR-LIKE KINASE 71 181 - -
Dod01g0058 245 Gene3D Transferase(Phosphotransferase) domain 1 41 191 - -
Dod01g0058 245 SUPERFAMILY Protein kinase-like (PK-like) 72 175 IPR011009 -
Dod01g0058 245 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 71 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0058 Dod-Chr1 989654 993986 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0058 75 183 Receptor kinase-like Gene Family AT3G28040 33.929 3.44e-12 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod01g0058 PK_Tyr_Ser-Thr 4.6e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0058 - - vra:106759489 159.844