Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0046 ATGTCCTTCGTCGGCACACATGAATACCTTGCCCCCGAAATTATCAAAGGAGAAGGTCATGGAAGTGCAGTTGATTGGTGGACATTTGGAATTTTCTTGCATGAGCTATTATATGGTAAAACACCTTTCAAAGGTTCAGGAAACCGAGCTACATTGTTCAATGTGGTAGGCCAGCAGCTCAAGTTTCCTGAATCACCAGCCACCAGTTATGCCAGCCGCGATCTGATCCACGGCTTGCTGGTGAAGGAGCCACAGCACCGCCTTGGGGTGAAGAGGGGTGCAACCGAGATCAAGCAGCACCCCTTCTTCGAAGGCGTGAACTGGGCGTTGATCAGGTGCAGCACACCACCAGAAGTGCCAAGACCAGTTGAATATGAGCTGCCAGCAAAGCTTGAAGCAGTTGATACTGTTGGGGTTGGTAACAATAGTAAGAGGATGGTAGGTAATAATGACATGAAGTCTGGTGGTAAATTTCTTGACTTTGAGTTCTTTTAG 495 0.4788 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIHGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVEYELPAKLEAVDTVGVGNNSKRMVGNNDMKSGGKFLDFEFF* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0046 164 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 164 - -
Dod01g0046 164 SMART serkin_6 1 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0046 164 Gene3D Transferase(Phosphotransferase) domain 1 2 120 - -
Dod01g0046 164 PANTHER FLIPPASE KINASE 1-RELATED 1 164 - -
Dod01g0046 164 ProSiteProfiles Protein kinase domain profile. 1 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0046 164 Pfam Protein kinase domain 2 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0046 164 SUPERFAMILY Protein kinase-like (PK-like) 2 129 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0046 Dod-Chr1 543968 544462 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0046 1 164 AGC Kinase Gene Family AT2G44830 81.287 5.72e-95 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dod01g0046 Pkinase 1.1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0046 - K08286 gmx:100818352 318.161