Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0045 ATGGAATACTGTCCAGGGGGTGACCTACACACTTTAAGGCAACGGCAACCTGGGAAACATTTCTCGGAGTATGCTGCACGTTTTTATGCTGCGGAGGTCCTGTTGGCACTTGAATATCTTCACATGCTTGGAGTTGTGTATCGAGACCTTAAACCTGAAAATGTGCTGGTCCGAGACGACGGCCACATTATGCTCTCAGATTTTGATCTTTCTCTTAGATGCACTGTTTCGCCTACCCTCATCAGAACTTCTCATGACAGTGACCCTTCAAAACGGGCTGGTGGTGCATTCTGTGTCCAGCCTGCTTGTATTGAACCTTCAACAGTATGCATCCAACCTTCCTGTTTTATGCCTCGCCTCTTTCCTCAGAAAAACAAGAAGTCGCGGAAGCCTAGAGCTGTAACCAGGGTTGCCTGCCAACACACTTCCTGA 432 0.4815 MEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCTVSPTLIRTSHDSDPSKRAGGAFCVQPACIEPSTVCIQPSCFMPRLFPQKNKKSRKPRAVTRVACQHTS* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0045 143 SMART serkin_6 1 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0045 143 Gene3D Transferase(Phosphotransferase) domain 1 1 113 - -
Dod01g0045 143 Pfam Protein kinase domain 1 76 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0045 143 ProSitePatterns Serine/Threonine protein kinases active-site signature. 45 57 IPR008271 GO:0004672|GO:0006468
Dod01g0045 143 PANTHER FLIPPASE KINASE 1-RELATED 1 134 - -
Dod01g0045 143 ProSiteProfiles Protein kinase domain profile. 1 143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0045 143 SUPERFAMILY Protein kinase-like (PK-like) 1 77 IPR011009 -
Dod01g0045 143 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0045 Dod-Chr1 542157 543936 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0045 1 133 AGC Kinase Gene Family AT2G44830 83.942 6.23e-71 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dod01g0045 Pkinase 1.1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0045 - - gmx:100803708 262.307