Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0044 ATGGAGAGGGTTGCGGAGCCAAAGGCACTTCCAAGGACCTTGCCTGTGTTGGTTGAGGTGTCTAATGCGCACACAGGTACGATAAGAGATGCTGGTCAGAGACTAACAGGGCAGGAGGTTTCAAGTGTGCGCGGGATTTCAGTAAGAGAAGTGAATCAGTTTTCGAAAGCAAGAGATGGACCTATGACGCGTCTGGCCTCCATCAGAGAAGTGGCTCAGTTATCAAATGCAAGAATAGTTTTGGTAAGAGAAGATATGGGGTTCGATACTCGATCCTCTCAAGAACCTGTTTCCCCTGCACCTACAAGAACATGGAAAAGAATGGCCTCTTTGCCAGAAAGGCAAGAACTTATGCCTGATATTGAGACAGTGAAAGGCAGCAATGTGTCATTTGGGGAAAGTGGTCCAAGTTCATTTGCTGGTGCTAGTCACCCCCCAGAACCTGTTGATATTGATCTTATGAGAACGGTTTATGTACCGATAGGTCAAAGTAAATCTGAGGCTGGATGCTTAATGAAGAGTATGACCTTGAAGGGTCCCTTCCTAGAAGATCTTTCGATTCATGTTCCCACTAAGAAACCAAGCCTGGCCGTTCTTTCCCCTGCGGCAAGCCTGGTTGAAGAATCGAATGACGTTGGGAACTTGTCCTCACCAATTTCTGGTGCTCGTGCTTCACAGAATACTGAGAACTCTCTCCTTCCCCTGGATTCTGAGGAGAAAGAATGTGTTTGGGATTCTTCCTTGCCTCCAAGTGGCAATGTCAGTCCACATAGTAGTATTGATAGTACTAGTGTTGTCAGAGCAATGAGCATTGCTAATAGTTGTGCAAGTACTTATCAGAGTGACGCACTCACTAGTGATGGCATGCTTAGTTTAGACAGGAATTTTGATAGTACTAAAGGAAGTGTGAGGGGGGATTCGCTTGAGAGTGCAAAAACTAGTGCTAGTCGAGCAAGTGATAGCAGTGGCCTCAGTGATGACAGTAACTGGAGTAACATCACTGAAAGTGCCAATAAGCCTCACAAGGGAAATGATCCTAGGTGGAAGGCCATCCTTGCCATCCGAGCACGTGATAGGTTTTTGGGCATGAGTCATTTTAGGTTACTCAAAAGGCTTGGTTGTGGTGATATTGGAAGTGTGTACCTCTCTGAGCTGAGTGCAACTCGGTGTTATTTTGCAATGAAAGTGATGGACAAGGCATCCCTAGCAAGCAGAAAGAAGCTGAACAGGGCACAGACAGAAAGGGAGATATTGCAGTTGCTGGACCATCCATTTCTGCCAACTTTGTATTACACATTTTGA 1302 0.4585 MERVAEPKALPRTLPVLVEVSNAHTGTIRDAGQRLTGQEVSSVRGISVREVNQFSKARDGPMTRLASIREVAQLSNARIVLVREDMGFDTRSSQEPVSPAPTRTWKRMASLPERQELMPDIETVKGSNVSFGESGPSSFAGASHPPEPVDIDLMRTVYVPIGQSKSEAGCLMKSMTLKGPFLEDLSIHVPTKKPSLAVLSPAASLVEESNDVGNLSSPISGARASQNTENSLLPLDSEEKECVWDSSLPPSGNVSPHSSIDSTSVVRAMSIANSCASTYQSDALTSDGMLSLDRNFDSTKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITESANKPHKGNDPRWKAILAIRARDRFLGMSHFRLLKRLGCGDIGSVYLSELSATRCYFAMKVMDKASLASRKKLNRAQTEREILQLLDHPFLPTLYYTF* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0044 433 PANTHER FLIPPASE KINASE 1-RELATED 75 433 - -
Dod01g0044 433 MobiDBLite consensus disorder prediction 299 343 - -
Dod01g0044 433 SUPERFAMILY Protein kinase-like (PK-like) 348 433 IPR011009 -
Dod01g0044 433 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 75 433 - -
Dod01g0044 433 Gene3D Phosphorylase Kinase; domain 1 353 433 - -
Dod01g0044 433 ProSiteProfiles Protein kinase domain profile. 366 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod01g0044 433 MobiDBLite consensus disorder prediction 299 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0044 Dod-Chr1 539546 542131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0044 1 433 AGC Kinase Gene Family AT2G44830 57.812 8.64e-138 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dod01g0044 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0044 - - gmx:100800019 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0044 01 539546 542131 Dod01g0044 01 539546 542131 ECH