Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod01g0038 | ATGGATTCCGAGCATGCATACTTGGAATATCTTCAGGGATTCCTGCTTGGCAATGAGTCAAGCATTCCGTTGAATGACTCAGACCTCAAAATGGATTACTCTGAGTCATATCAAGCTGTTCCAAACCCTAGTTGTGGCAGTAATTCAAATACAGCTTCTCAAGGTGGGAGTTTTATTGCCATGGCAGGGCATGAAGTCCACACGCCTCCAACATGGAAACGCTATAGGGGCGTGAGGCGTAGGCCATGGGGGAAGTTTGCAGCAGAAATCAGGGATCCTAAGAAGAATGGTGCTAGGGTTTGGCTTGGAACTTATGAGACGGAAGAGCAAGCGGCTTTAGCTTATGACAAAGCAGCTTTCAAGATGCGCGGTCGAAAAGCCAAGCTAAATTTTCCTCACCTCATTGGCTCAGATGAGCAATCTGAGCCAATGAAGGTAGTCGCTATGAAGCGAAGCTCACCAGAACCTTCTTCGCCTTCATTGGAGGATGGTTCAAACTCACGAGGATCAAAGAGGAGGAGAAACTTAGCTGATCTATTGAATAAGTTAGCTAAGAATAGAGGCCAAGCTACGGTGGTCAAAATCGACCCAAATGCAAATGTTGCTGATCAATGGTTGAATGATGACTTCAATGTCATTGCAGTCTAA | 648 | 0.4568 | MDSEHAYLEYLQGFLLGNESSIPLNDSDLKMDYSESYQAVPNPSCGSNSNTASQGGSFIAMAGHEVHTPPTWKRYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETEEQAALAYDKAAFKMRGRKAKLNFPHLIGSDEQSEPMKVVAMKRSSPEPSSPSLEDGSNSRGSKRRRNLADLLNKLAKNRGQATVVKIDPNANVADQWLNDDFNVIAV* | 216 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod01g0038 | 215 | MobiDBLite | consensus disorder prediction | 140 | 173 | - | - | |
Dod01g0038 | 215 | SUPERFAMILY | DNA-binding domain | 74 | 133 | IPR016177 | GO:0003677 | |
Dod01g0038 | 215 | Pfam | AP2 domain | 74 | 124 | IPR001471 | GO:0003700|GO:0006355 | |
Dod01g0038 | 215 | SMART | rav1_2 | 74 | 138 | IPR001471 | GO:0003700|GO:0006355 | |
Dod01g0038 | 215 | PANTHER | DNA-BINDING DOMAIN | 2 | 189 | IPR044808 | GO:0003700|GO:0009873 | |
Dod01g0038 | 215 | CDD | AP2 | 73 | 134 | IPR001471 | GO:0003700|GO:0006355 | |
Dod01g0038 | 215 | PRINTS | Ethylene responsive element binding protein signature | 75 | 86 | IPR001471 | GO:0003700|GO:0006355 | |
Dod01g0038 | 215 | PRINTS | Ethylene responsive element binding protein signature | 114 | 134 | IPR001471 | GO:0003700|GO:0006355 | |
Dod01g0038 | 215 | Gene3D | AP2/ERF domain | 73 | 133 | IPR036955 | GO:0003700|GO:0006355 | |
Dod01g0038 | 215 | PANTHER | AP2-DOMAIN DNA-BINDING PROTEIN | 2 | 189 | - | - | |
Dod01g0038 | 215 | ProSiteProfiles | AP2/ERF domain profile. | 74 | 132 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod01g0038 | Dod-Chr1 | 445533 | 446180 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod01g0038 | 74 | 157 | AP2-EREBP Transcription Factor Family | AT2G44840 | 76.190 | 2.44e-39 | 133 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Dod01g0038 | AP2 | 3.9e-15 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod01g0038 | K09286 | - | gmx:102663872 | 204.912 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod01g0038 | 01 | 445533 | 446180 | Dod01g0038 | 01 | 445533 | 446180 | ECH |