Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0034 ATGGTGGAAGAGAAATCCATGACACTTGAAGCCATTATAAAGGAACAAGTTGATCTGGAGAACCTTCCCCTCGAGGAGGTTTTTGATAATCTCAAATGTACAAGAGAAGGATTAAGCTCTGAGCAAGTGAAAGAGAGGCTAGACTTGTTTGGATACAATAAGCTTGAAGAAAAGAAGGAAAGTAAGATACTCAAGTTTTTGGGCTTTATGTGGAATCCTCTATCATGGGTCATGGAAGCTGCTGCTATCATGGCCATTGCTATGGCACATGGAGGGGGTGAACCTGGGGATTATCAAGATTTTGCTGGCATTATTATTTTGCTACTAGTGAACTCTACCATCAGTTTCATAGAAGAAAACAATGCTGGTAATGCAGCAGCCGCCCTTATGGCAAGATTGGCCCCAAAGGCAAAGGTACTCCGAGATGGAAAATGGAGTGAAGAAGATGCTTCAGTGTTGGTTCCTGGAGACATAATTAGCATCAAGCTAGGAGATCCTTTGAAGATTGATCAGTCTGCTCTTACTGGGGAGTCACTTCCAGTTACAAAACATCCTGGACAAGGAGTGTATTCTGGTTCAACATGCAAGCAAGGAGAAATTGAGGCAGTAGTTATTGCAACTGGAGTTCACACTTTTTTTGGAAAGGCCGCTCATCTTGTGGAAAATACCACACATATTGGACATTTCCAGAAGGTTCTGACATCAATTGGGAATTTCTGCATCTGCTCCATTGCTGTTGGGATGATTATTGAAATCATTGCGATATATGGGATCCAGGGAAGGGGATACCGAATTGGTATTGATAACCTCCTTGTGCTGCTAATTGGTGGTATCCCTATTGCAATGCCAACTGTCCTTTCTGTTACAATGGCCATTGGTTCACACCGGTTGTCTCAGCAGGGTGCTATAACAAAGAGAATGACTGCCATTGAAGAAATGGCTGGAATGGATGTGCTATGCAGTGACAAAACAGGCACATTAACTCTCAACAGGCTTACAGTGGACAAGAATACGATTGAGGTCTTTGCCAAAGGAGTTGATAAGGATATGGTTGTACTCATGGCTGCAAGGGCATCAAGGCTAGAGAACCAGGATGCAATTGATTGTGCAATTGTTTCAATGTTAGCAGACCCAAAGGAGGCACGAGCTGGAATAGAAGAAGTTCACTTCCTTCCATTTAATCCGACAGATAAAAGAACTGCACTTACATACATTGATGCTGCTGGTAAGATGCACAGGGTTAGCAAAGGTGCACCAGAACAGATTCTAAACCTTGCACATAACAGCACAGAAATTAGACAGAAGGTGCATGCAATTATTGACAAGTTCGCAGAACGTGGGCTTCGCTCCCTCGGAGTTGCCCGCCAGGAAGTACCTGAGGGAACTAAAGATAGTTCAGGAGGCCCCTGGGAATTTGTTGGCCTACTCCCTCTTTTCGATCCTCCTCGCCATGATAGTGCTGAAACAATCAGAAGAGCTCTTGATCTTGGCGTGAGTGTCAAAATGATCACTGGTGATCAGCTTGCGATAGCTAAGGAAACAGGAAGGCGTCTTGGGATGGGAACTAACATGTATCCCTCTTCATCACTGCTTGGTGAAAGTAAAGATGACTTTGCCACTCTCCCCGTTGATGATCTTATTGAGAATGCTGATGGTTTTGCTGGCGTTTTTCCTGAACATAAGTATGAGATTGTGAAGAGGTTACAAGCTAGAAAGCACATTTGCGGAATGACTGGTGATGGAGTGAATGATGCACCTGCCTTGAAGATAGCCGACATAGGTATCGCCGTAGCAGACTCCACAGATGCTGCCAGAAGTGCTTCTGACATAGTTCTAACTGAACCTGGGTTGAGTGTGATCATAAGTGCTGTTTTAACTAGCCGTGCAATTTTCCAGAGAATGAAGAACTACACAGTAATATCACAACTATTAAAATATCAAGAAAAGATTATAATTTTCCTTGGTCTTGGCTTCATGTTACTCACATGCATTTGGAAATTTGACTTCCCTCCCTTTATGGTTCTTGTCATCGCCATTCTTAATGATGGTACCATCATGACAATATCTAAAGACAGGGTTAAGCCTTCTCCAGTTCCTGATAGTTGGAAGCTTAGTGAGATTTTTGCAACAGGGATTGTCCTAGGCGGCTATCTGGCTCTAATGACGGTGGTATTCTTCTGGGCAGCATATACAACAAACTTCTTTCCTAAACATTTTAATGTGAGACATCTCCGCTACAACATGAGTGCACCTATGACTGATGATGAGAAAAAAATGCTGGGATCTGCTGTCTATCTTCAAGTCAGCACAATAAGTCAAGCCTTAATTTTTGTGACTCGCTCGAGGGGGTGGTCCTACACAGAAAGACCTGGTCTTTTGCTTGTTGTTGCTTTCATTATAGCTCAGCTGGTTGCAACTGTGGTATCTGCCACTCTCACTTGGAAACTAGCAGGAATCAAAGCCATAGGATGGGGCTGGACAGGAGTCATCTGGTTGTACAACACTATAACTTACGTACTTTTGGATCCTATAAAATTTGCTGTTCGTTATGCATTAAGTGGAAGAGCTTGGAATCTGGTGGTAGACCAACGAACTGCCTTTACCAACAAGAATGACTTCGGCAGAGAAGCTCGAGAGGCTAAATGGGCTGCTGAGCAGAGAACTTTACATGGCCTCCAGTCTGCAGACTCAAAAATTGAGAGGCACACCTTCAGGGAAATAAATACACTAGCAGAAGAGGCTAAGAGGCGAGCAGAATTAGCAAGGATGAGAGAGCTTCACACTCTTAAAGGTCGTGTGGAATCATTTGCCAAGCTAAGGGGTTTAGATATTGACGCCATCAACAGTCACTACACAGTATAA 2862 0.435 MVEEKSMTLEAIIKEQVDLENLPLEEVFDNLKCTREGLSSEQVKERLDLFGYNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIAMAHGGGEPGDYQDFAGIIILLLVNSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDPLKIDQSALTGESLPVTKHPGQGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTTHIGHFQKVLTSIGNFCICSIAVGMIIEIIAIYGIQGRGYRIGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDKNTIEVFAKGVDKDMVVLMAARASRLENQDAIDCAIVSMLADPKEARAGIEEVHFLPFNPTDKRTALTYIDAAGKMHRVSKGAPEQILNLAHNSTEIRQKVHAIIDKFAERGLRSLGVARQEVPEGTKDSSGGPWEFVGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGESKDDFATLPVDDLIENADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKIADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVISQLLKYQEKIIIFLGLGFMLLTCIWKFDFPPFMVLVIAILNDGTIMTISKDRVKPSPVPDSWKLSEIFATGIVLGGYLALMTVVFFWAAYTTNFFPKHFNVRHLRYNMSAPMTDDEKKMLGSAVYLQVSTISQALIFVTRSRGWSYTERPGLLLVVAFIIAQLVATVVSATLTWKLAGIKAIGWGWTGVIWLYNTITYVLLDPIKFAVRYALSGRAWNLVVDQRTAFTNKNDFGREAREAKWAAEQRTLHGLQSADSKIERHTFREINTLAEEAKRRAELARMRELHTLKGRVESFAKLRGLDIDAINSHYTV* 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0034 953 CDD P-type_ATPase_H 37 846 IPR006534 GO:0008553|GO:0016021|GO:0120029
Dod01g0034 953 SMART Cation_ATPase_N_a_2 18 90 IPR004014 -
Dod01g0034 953 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 37 810 IPR006534 GO:0008553|GO:0016021|GO:0120029
Dod01g0034 953 Pfam E1-E2 ATPase 133 299 - -
Dod01g0034 953 SUPERFAMILY HAD-like 316 625 IPR036412 -
Dod01g0034 953 Gene3D - 317 615 IPR023214 -
Dod01g0034 953 Gene3D - 97 820 - -
Dod01g0034 953 PANTHER PLASMA MEMBRANE ATPASE 6 933 - -
Dod01g0034 953 Gene3D - 135 207 - -
Dod01g0034 953 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 553 659 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod01g0034 953 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 104 340 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod01g0034 953 Pfam Cation transporter/ATPase, N-terminus 21 84 IPR004014 -
Dod01g0034 953 Pfam haloacid dehalogenase-like hydrolase 316 592 - -
Dod01g0034 953 SFLD Haloacid Dehalogenase 302 629 - -
Dod01g0034 953 SUPERFAMILY Calcium ATPase, transduction domain A 135 220 IPR008250 -
Dod01g0034 953 Gene3D - 332 479 IPR023299 GO:0000166
Dod01g0034 953 PANTHER CALCIUM-TRANSPORTING ATPASE 6 933 - -
Dod01g0034 953 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 852 IPR023298 -
Dod01g0034 953 PRINTS P-type cation-transporting ATPase superfamily signature 601 613 - -
Dod01g0034 953 PRINTS P-type cation-transporting ATPase superfamily signature 496 506 - -
Dod01g0034 953 PRINTS P-type cation-transporting ATPase superfamily signature 474 485 - -
Dod01g0034 953 PRINTS P-type cation-transporting ATPase superfamily signature 578 597 - -
Dod01g0034 953 PRINTS P-type cation-transporting ATPase superfamily signature 170 184 - -
Dod01g0034 953 PRINTS P-type cation-transporting ATPase superfamily signature 320 334 - -
Dod01g0034 953 ProSitePatterns E1-E2 ATPases phosphorylation site. 322 328 IPR018303 -
Dod01g0034 953 Gene3D - 902 953 - -
Dod01g0034 953 PRINTS H+-transporting ATPase (proton pump) signature 550 566 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod01g0034 953 PRINTS H+-transporting ATPase (proton pump) signature 436 454 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod01g0034 953 PRINTS H+-transporting ATPase (proton pump) signature 578 594 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod01g0034 953 PRINTS H+-transporting ATPase (proton pump) signature 609 634 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod01g0034 953 PRINTS H+-transporting ATPase (proton pump) signature 765 786 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod01g0034 953 SFLD p-type atpase 302 629 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0034 Dod-Chr1 407713 416146 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0034 4 953 Primary Pumps ATPases AT5G62670 77.720 0.0 1498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0034 K01535 - gmx:100794938 1593.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0034 01 407713 416146 Dod01g0034 01 407713 416146 ECH