Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0025 ATGGAACCCTTCAAAGGACAAGGAGGCATTCAGATGCTGCTAACTGCTGAACAAGAAGCACAACACATTGTTTCCAATGCGAGAAACTTGAGGACACAAAGGTTGAAGCAGGCCAAAGAAGAGGCTGAAAGGGAGGCAACTCAATACAGATCTCACATGGAAGAAGAATACCAAAAGTCAATCTCAGAGACCACTGGGAGTTCTGGATCCAATGTAAGAAGGCTTGAGGAGGAAACAGATGCTAAGATAAGAGGTTTAAAGAGATCAGCTTCAAAGGTCTCTTCTGAAGTTGTTGACATGCTGCTCAATTATATTTCAAATATTAAAGTGTAG 333 0.4174 MEPFKGQGGIQMLLTAEQEAQHIVSNARNLRTQRLKQAKEEAEREATQYRSHMEEEYQKSISETTGSSGSNVRRLEEETDAKIRGLKRSASKVSSEVVDMLLNYISNIKV* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0025 110 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 8 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Dod01g0025 110 Gene3D - 2 110 - -
Dod01g0025 110 Coils Coil 32 59 - -
Dod01g0025 110 PANTHER V-TYPE PROTON ATPASE SUBUNIT G3 1 109 - -
Dod01g0025 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Dod01g0025 110 MobiDBLite consensus disorder prediction 36 59 - -
Dod01g0025 110 MobiDBLite consensus disorder prediction 36 75 - -
Dod01g0025 110 Pfam Vacuolar (H+)-ATPase G subunit 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Dod01g0025 110 SUPERFAMILY F1F0 ATP synthase subunit B, membrane domain 11 58 IPR028987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0025 Dod-Chr1 352849 355030 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0025 1 109 Primary Pumps ATPases(2) AT3G01390 54.128 7.60e-33 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0025 K02152 - gmx:100818549 185.267