Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0021 ATGAGAACAGGTGGTGGCTTCAACACCAATTCTTCTTCTTCCTGTTGCTCCCGTTTCTGGTCGTCGGCGCTCCGAGCCAAGCGATTCGTATCGCCGGCCGAGAAGGCCGCCGGCGATAATTCTGGCCGTGGCCTCTCCCGCCGCCTTGGAGTCATCGACCTCGTACTCCTCGGCATCGGAGCCTCCATCGGCGCCGGCATCTTCGTCATCACCGGCACCGTCGCCCGCGACACCGGTCCCGGAGTAACAATAAGTTTTCTACTTGCTGGAGCATCATGTGTAGTAAATGCACTCTGTTATGCTGAGCTAGCTTCTCGTTTCCCTGCTGTAGTTGGAGGAGCATATCTATATGCATATACAGCTTTTAACGAACTCACAGCTTTTCTTGTTTTTGCACAATTAATGCTTGACTATCATATTGGAGCAGCTAGCATAGCAAGAAGCCTAGCAAATTATGTGGTATCAATTCTAGAGCAAATCCCTGTTTTACAAGGTAACATTCCAAAATGGATTGGGCATGGTGAGGACATTGGAGATGTGCTATCCATCAATGTCTTAGCTCCAATTCTCCTAATACTTCTCACTGTAATTCTCTGTTGGGGTGTTGAAGAATCTTCAGCTGTGAATTCAATTATGACAGTGACAAAGGTAGTCATTGTAATCATTGTCATTCTTGCGGGAGCTTTTGAGGTCAATGTTTCAAACTGGTCTCCCTTTGCTCCAAATGGTGCGAAAAGCATATTTACGGGAGCTACTGTAGTCTTTTTCGCTTATGTTGGATTTGATGCAGTTGCCAATTCTGCTGAAGAATCTAAGAGGCCACAGCGGGATCTGCCAATAGGCATAATTGGAAGCCTCTTAGTATGTATTGCATTGTACATTGGAGTATGCTTAGTGATTACTGGGATGGTTCCATATACGCTTCTTGGAGAAGATGCTCCTTTGGCTGAAGCTTTTACATCTAAGGGATTAAAATTTGTTTCTGTTCTGATCAGTGTCGGTGCAGTTGCTGGACTTACAACAACACTCCTTGTTGGTCTCTATGTTCAGTCTCGGTTATATCTCGGGCTTGGCAGGGATGGTTTATTACCATCAATATTTGCTAAAGTTCACTCCAAACGCCACACTCCCATTCATTCTCAGATCTGGGTTGGCATAGTTGCCAGTGTTTTGGCTGGGCTCTTGAATGTGACAATGCTTTCCCACATTCTTTCTGTTGGTACACTGACTGGCTATTCAGTTGTCTCAGCATGTGTTGTAGTACTTCGCTGGAAGGATAAGACAAATAGTCAAGTATCATCTTCAGCTAGGCAGGAAGGTGTAATCTGCCTCATTACTGTTGCTGCTTGTGGATTTGCTACTGGGCTCTTATTCCGTTATGATGCTTCACCTATTCTTATGATTCTATTTATAGTTGTCGCAGTATGTGCTTCTGCTGCTCTTCTTTTCCGCCAGGTCTATGGAGATCCACCAGGATTTTCTTGCCCTGCGGTTCCCCTTCTGCCAAGCATTTGCATCTTTTTTAATATATTCTTATTTGCCCAGTTGCATTATGAAGCATGGGTGAGATTTGTGGTTCTTAGTGTTGTCATGGTTGGTGTTTATGCAATATATGGCCAGTATCATGCTGACCCCAATGCAACAGATACCATCATTTATCACCTCGCACCAGAGGAGGAAGCTCAATGA 1689 0.45 MRTGGGFNTNSSSSCCSRFWSSALRAKRFVSPAEKAAGDNSGRGLSRRLGVIDLVLLGIGASIGAGIFVITGTVARDTGPGVTISFLLAGASCVVNALCYAELASRFPAVVGGAYLYAYTAFNELTAFLVFAQLMLDYHIGAASIARSLANYVVSILEQIPVLQGNIPKWIGHGEDIGDVLSINVLAPILLILLTVILCWGVEESSAVNSIMTVTKVVIVIIVILAGAFEVNVSNWSPFAPNGAKSIFTGATVVFFAYVGFDAVANSAEESKRPQRDLPIGIIGSLLVCIALYIGVCLVITGMVPYTLLGEDAPLAEAFTSKGLKFVSVLISVGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSIFAKVHSKRHTPIHSQIWVGIVASVLAGLLNVTMLSHILSVGTLTGYSVVSACVVVLRWKDKTNSQVSSSARQEGVICLITVAACGFATGLLFRYDASPILMILFIVVAVCASAALLFRQVYGDPPGFSCPAVPLLPSICIFFNIFLFAQLHYEAWVRFVVLSVVMVGVYAIYGQYHADPNATDTIIYHLAPEEEAQ* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0021 562 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Dod01g0021 562 Pfam Amino acid permease 49 458 IPR002293 GO:0016020|GO:0022857|GO:0055085
Dod01g0021 562 Pfam C-terminus of AA_permease 493 542 IPR029485 -
Dod01g0021 562 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 11 561 - -
Dod01g0021 562 PANTHER CATIONIC AMINO ACID TRANSPORTER 9-RELATED 11 561 - -
Dod01g0021 562 Gene3D Amino acid/polyamine transporter I 45 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0021 Dod-Chr1 315613 319616 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0021 6 486 Organic Solute Cotransporters AT1G05940 70.697 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0021 K03294 - gmx:100804988 887.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g0021 01 315613 319616 Dod01g0021 01 315613 319616 ECH
Dod02g2572 02 56969250 56972227 Dod01g0021 01 315613 319616 PCT