Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1992 ATGGAGAGGAAAAGGACGAGGTCGGTGGCGGAGGAGCAGAGAGCTACCAGGGATGCGACGGTGAAGACGTTGCACGCCGGTGTCTTGGTTGAAGCCGCTGGGGATGGCGGAGGAGCAGAGGGCTACCAGAGATGCGACGGTCAAGACGTTGCACGCCTGTATCTTGGTTGGAGCCGCTGGGTATGGCGGTGTGGTCGACTGCAACATCACCCTGGATGGGAAATCTGCCGGAGAAGCTGGAGTAGCCAGCGTCGTAGCCGAAATGTTCTAAAGAGACCACTGCCTAATGTCAGGAAGCGTGTTAAAGTTCTCAAAGAGATCCAGAAGGAGTGTCGAGCTAGGGAGAAGAAAAGGAAAGGAGACCAAATTGAAGGGGAAGATAGTGATAAGTCTATTGAAGAGTTCTTGCTAGCTTTACTTCGTGCATTGGATAAGCTCTTCGTAAATCTTCAAGTATTGCAAACCTATAATGTTGGAAAGTCTGTCAATAATTTACGTAGTCGCAAAAATTTTGAAATTCAAAAGAAAGCAAGGAGTTTAGTTGACACATGGAAGAAACGTGCTGAGGCTGAAATGAATAAAAATGATGGAAAATCTGGTTCAACCCAGGCCCTTTCTTGGTCAGCAAAGCCAGCACCTTTTGAGGTTTCTCAAACTAGAAATAAGAAAATAGGAGGATCTGTTGAGGTCATTGCAAGGTGCTCTGCAACGCAAAGCATGGCATCTAAAAGTTCCCAAGCTAAGCCTAGCACTGGAGAAGCATTGTCTAAATCCTCTCGATCTCCTGGTTTAGCAAAATCAATTAATGCTTCAGTGGGTTGCAATTCAAAGTAA 834 0.464 MERKRTRSVAEEQRATRDATVKTLHAGVLVEAAGDGGGAEGYQRCDGQDVARLYLGWSRWVWRCGRLQHHPGWEICRRSWSSQRRSRNVLKRPLPNVRKRVKVLKEIQKECRAREKKRKGDQIEGEDSDKSIEEFLLALLRALDKLFVNLQVLQTYNVGKSVNNLRSRKNFEIQKKARSLVDTWKKRAEAEMNKNDGKSGSTQALSWSAKPAPFEVSQTRNKKIGGSVEVIARCSATQSMASKSSQAKPSTGEALSKSSRSPGLAKSINASVGCNSK 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1992 277 SMART TFS2_5 111 190 IPR003617 GO:0005634
Dere14g1992 277 MobiDBLite consensus disorder prediction 191 219 - -
Dere14g1992 277 ProSiteProfiles TFIIS N-terminal domain profile. 114 191 IPR017923 -
Dere14g1992 277 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 117 201 IPR035441 -
Dere14g1992 277 MobiDBLite consensus disorder prediction 195 219 - -
Dere14g1992 277 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 116 271 - -
Dere14g1992 277 Pfam TFIIS helical bundle-like domain 139 186 IPR017923 -
Dere14g1992 277 MobiDBLite consensus disorder prediction 238 277 - -
Dere14g1992 277 CDD TFIIS_I 115 189 - -
Dere14g1992 277 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 96 202 IPR035441 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1992 Dere-ChrDere14 27136470 27140833 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Dere14g1992 Med26 1.4e-10 No_clan