Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1953 ATGGCTTCTTCTGGTTCTAGCTTTCAGCAGGAAGATCATATGATAGAGCAGAGGAAGAGGAAGAGAATGCTGTCGAATCGCGAGTCCGCGCGCCGATCGAGGATGAAGAAGCAGCAGCATCTGGGCGATCTGATTGGGGAAGTGGGAGAGCTGAGGAAGGAGAAGGACCAGATCATGACGAAGCTGGGGATGAGCACCCAACTGTACCAGAAGATTGAGGTAGAGAATGCGATTCTGAGGACTCAGATGGCAGAGTTAGGTCACAGATTGCAGTCTCTGAATGAAATCATAGACTCCATGAACTCAGGCAATTACTATGAGATTGAGGAGATGATGATGAACAGTGAGTGTGGCTTCATGAACCCATGGAATATTCAGCCTCTCATGGCGTCTGCTAACGTGTTGATGTATTGA 414 0.4831 MASSGSSFQQEDHMIEQRKRKRMLSNRESARRSRMKKQQHLGDLIGEVGELRKEKDQIMTKLGMSTQLYQKIEVENAILRTQMAELGHRLQSLNEIIDSMNSGNYYEIEEMMMNSECGFMNPWNIQPLMASANVLMY 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1953 137 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 21 36 IPR004827 GO:0003700|GO:0006355
Dere14g1953 137 MobiDBLite consensus disorder prediction 12 39 - -
Dere14g1953 137 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 132 - -
Dere14g1953 137 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 16 62 IPR004827 GO:0003700|GO:0006355
Dere14g1953 137 SMART brlzneu 14 78 IPR004827 GO:0003700|GO:0006355
Dere14g1953 137 MobiDBLite consensus disorder prediction 1 39 - -
Dere14g1953 137 CDD bZIP_plant_GBF1 19 70 IPR045314 GO:0003700|GO:0006355
Dere14g1953 137 FunFam BZIP transcription factor 16 67 - -
Dere14g1953 137 Pfam bZIP transcription factor 17 75 IPR004827 GO:0003700|GO:0006355
Dere14g1953 137 Gene3D - 16 72 - -
Dere14g1953 137 SUPERFAMILY Leucine zipper domain 18 71 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1953 Dere-ChrDere14 25287271 25287684 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1953 11 137 bZIP Transcription Factor Family AT4G34590 51.429 2.70e-39 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere14g1953 bZIP_1 1.4e-09 CL0018