Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1944 ATGTTTTCTCTCTGTTATCACTTTGCATGCCTCTTCCTCTTGCTGGGTTTTGCATCAGATATCGGACATGCACAGTTTTATCAGAGAGTTGGAAGCAAATTGGTCTCTTACGAAAAGATCGTCGTCGACCACGCCGGGAACGGAAACTTCTCCACCATACAAGCCGCCATAAATTCAGTCCCTTCCAACAACAGCAACTGGGTTTCCATCAACGTAAAGGCAGGCATCTACAGGGAAAAGGTGAGGATTCCTTATGACAAGCCTTACATCGTATTGAAAGGAGAGGGAAAGAGGAGAACTCTTGTTGTTTGGGACGACCATGACACGTTGGCATCGAGTCCTACATTCACATCCATGGCTGATAATGTTGTCGTCAAATGCATGAGCTTTAGGAATTCATACAATAATCCAATCAACAGTAACCCTCGACGACCGGCCGCGGCGGCAATGGTGGCTGGCGACAAGGCTTTCTTCTTCCGAGTTGGCTTTTTTGGTTTACAAGATACTCTGTGGGACGATCAAGGAAGACATTACTACAAGCTTTGTACTATACAAGGTGCTGTTGATTTTATTTTTGGAGCAGGCCAATCTTTATTTGAGAGATGTTCCATCTCAGTGATTGGGGGAGCTCTGGAGGCAGGGCTTCCGGGGTACATCACAGCACAAGGAAGAACACATCCGAATGATGCAAATGGGTTTGTGTTTAAGGAATGCCACGTGTTCGGAAACGGTTCGTCGTACTTGGGAAGGCCTTGGAGAGGCTACTCCAGAGTCCTCTTTTACAAGACCAACATGTCCCACGTTGTCCAACCCCAAGGCTGGGACCCTTGGAATTTCATTGGCCATGAGAATCGAATCACATTTTCAGAGTATGGGTGTTTTGGAGCTGGGTCCAATACTTCGCAGCGAGTGAACTGGACAAGGAAGCTGGATTTAGCGACGGTTGAGCAAATGGTTAGCATGAGCTTCATTGACTCTGAAGGATGGCTTCAAAATCAACTTTTTTGA 1008 0.4653 MFSLCYHFACLFLLLGFASDIGHAQFYQRVGSKLVSYEKIVVDHAGNGNFSTIQAAINSVPSNNSNWVSINVKAGIYREKVRIPYDKPYIVLKGEGKRRTLVVWDDHDTLASSPTFTSMADNVVVKCMSFRNSYNNPINSNPRRPAAAAMVAGDKAFFFRVGFFGLQDTLWDDQGRHYYKLCTIQGAVDFIFGAGQSLFERCSISVIGGALEAGLPGYITAQGRTHPNDANGFVFKECHVFGNGSSYLGRPWRGYSRVLFYKTNMSHVVQPQGWDPWNFIGHENRITFSEYGCFGAGSNTSQRVNWTRKLDLATVEQMVSMSFIDSEGWLQNQLF 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1944 335 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 35 331 - -
Dere14g1944 335 SUPERFAMILY Pectin lyase-like 39 331 IPR011050 -
Dere14g1944 335 Gene3D - 36 335 IPR012334 -
Dere14g1944 335 FunFam Pectinesterase 35 334 - -
Dere14g1944 335 Pfam Pectinesterase 40 324 IPR000070 GO:0030599|GO:0042545
Dere14g1944 335 ProSitePatterns Pectinesterase signature 2. 184 193 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1944 Dere-ChrDere14 25144157 25148951 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1944 1 283 Carbohydrate Esterase AT2G19150 42.456 2.46e-77 237