Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1942 ATGGGAAAGCGAATTCGTGAGAAACATGCTGTGACAGTGGACAGTAGTAGCAGTGGTACTAGCACTAGTCATCATGGAAGAGCTTGGAGTATCCTAAATGTTATCAAGTATCATCATTGGCGTCAACATGTCAAGAAAAGACTCACACACAAGAGGCATGGTGGTGGAAAAATTCCTGCTAAAGTTGATATTCCAAGTGAGGCAGATAATTCACAGGACTGTGAGCCGAATTCAAACTTATCAATTGTTGAAGAAACTTCAGTACAGTCCACTCCACCAGCCAGACAATCCATTAAAGCTAGACTAAAAGCCCTTATTGCTGAAGAGATAACTAGAAAGAAGGGTCAACATAAAAGAAGTTCAACCTACCTTGTAAAACCACAAACTTCAAATCAAGTTGATCCTATTCCCAATTTAGATTGTTCAAATCTTGATGTTGTCACTGGATTGTTATTAAATGAAAAAAATCCTACAATGGTTCCAGAAACTATTGACACATTGGATGAAACGCCCTCAATAAGCTCAACCACCAATAATGAAACATGTGTAGAGTGTGGTACCAGGTTTTCTAGTGATTTCGTTGAGGATAATAGTCAAGTTCATAAGCATCATAAGCAACCATCAAAATATCATCAAACATTTATGATGGATACATCGATCTGTGAAGAAAAGTCAATGCAGGCCAAGTTACTTACAACTGATGTCTCTCCCTATCTCTTCAAGGATTTCCTGGATGCTCTTGATATAATTAATGCAAACAAGGATTTGCTGTTAAAATTTCTACAACATCCACGTTCTCCTTTGGCATACCACTTTCATAACCAACAAGCATCAACTGGAAAAATGGGACTAAACAAGTCTTTTTCATTTCCTGTACCTGGCTCATCATCATCTCAAGTTGAAGGACAAAATATAAAAAAAATGGAAAATGACTTGTTCAAATCAAGAAAGGTACATAATGACAATCAAGCACAAAGAGGAACATCTCTGCCTCAATCTTCAGAAAATTTTTACCAGCAGTCTGTGCCATTAGATTCTTCTTGTAGGTTTATTGAAAGAGACTATTATAATTCTTCAACAATGCCATCCCAAGTTCAAAATCATAGGGTTATTAAGCATTTTAAAGATCTTAGACAGAAGATGAAACATGTTATTAAAGAGAGCAAAAACGAGAAACATCGCATAACCATGGATGCTATACTTCACAAAGTTCCTCATGGAAATGAAGTTCCCAAAGATTTGAAGAAGATTCTTGAGCAATCCAAAGACCTTACATTTAATGGAGAAGGTATAGACATTACTTCAACTAGCAAATTTGATGGTTATAAAAGGCGGCTAGTATCCCCAATGAGGACTTCATCTTTAAATGAATCAGTTGGGAGATATTCTCAGCTCTATGACACTTGTTTTAACAGAGAAGCTAAGCACCCTAGATCTGAAAGGTTAAAGTTGAAAGCACCAAAGAAAAGCTCATTATTAAGGACACCGAAAACCTTTCAAAGGTTTCTTTCGTTGCCTAATCTTACCGACTATTTTTCTCAAAGTGAGGAGACTTCTGTTCTTTTACCTCCTCAGATTCCAGTTAGGAAATTTGGAGAGAAAACCACAAGCTTAAGTACTAGTGTAGATAATATTACAATTCCACAAAAAGTTTCCAAAAGCATCCAAAAAGAAATGTTCATTAGAAGTGATACAGGGTCTGGGTCAGATGAGGATAAGGAGGAGTCAAATCAAAAGAACAACATAGGAGATGATGATGTTTATGAAAATTTGACAGATAGTGGAGAATCAACTTCTATGGTGGCTAAAGCAAAATCAATCTCCTTTTCTGATTCAAGCTTCCTAGATGACTCAATTGACTTTGATGACAAGTTATCTTTACCAGAAGATTCGAGAATAAAGCCAAGGTCAATAGATGGATTGGGTCATGTGATTGAGCAGTTTCAAGAAGCTAAAATTGTAAATTATCAAGAACTAGAAAGGAGTGAAGATGACTTTCTAAAATTTGACTTTCTAAACAACCATGTAAACTTGGAAATTCCTGGTCTTGAAGTGGATGCAAATAGTGAAGCTGAATTCAACTATGTGAGAGATGTATTAGAGCTCTCTGGGCTATTCACGGATTATGACACCCTTGGGATATGGTATTCCAATGACCAACCAATTGATCCCACAGTGTATGAAGAGTTAGAAGGATGCTTGCTCTTGGATCCTAAGTGTTCTGGGGGTGTTCATTCTAACCATTTGCTTCTTTTTGATATGATCAACGAGGTATTAGTTGAGATTTTTGGGAGATCATACAGTTATTATCCAAAACCATTGTCTTCTCTCTCCCATGTTCATCCAATGCCAGCAGGAAACCATATTCTACGAGAAGTGTGGACTCTCATAAGGTGGTATCTAAGTTCAAACGTAGAATTATATCCGTCATTGGATTACTACGTGAGCCGAGACCTTGCAAGAAGTGATGGGTGGATAAATCTGCAATTTGATTCTGAGTGTGTTGGGCTTGAGCTAGATGACTTGATTTTTGATGATCTTTTGGAAGAAATCATCTATAGTTGA 2565 0.3692 MGKRIREKHAVTVDSSSSGTSTSHHGRAWSILNVIKYHHWRQHVKKRLTHKRHGGGKIPAKVDIPSEADNSQDCEPNSNLSIVEETSVQSTPPARQSIKARLKALIAEEITRKKGQHKRSSTYLVKPQTSNQVDPIPNLDCSNLDVVTGLLLNEKNPTMVPETIDTLDETPSISSTTNNETCVECGTRFSSDFVEDNSQVHKHHKQPSKYHQTFMMDTSICEEKSMQAKLLTTDVSPYLFKDFLDALDIINANKDLLLKFLQHPRSPLAYHFHNQQASTGKMGLNKSFSFPVPGSSSSQVEGQNIKKMENDLFKSRKVHNDNQAQRGTSLPQSSENFYQQSVPLDSSCRFIERDYYNSSTMPSQVQNHRVIKHFKDLRQKMKHVIKESKNEKHRITMDAILHKVPHGNEVPKDLKKILEQSKDLTFNGEGIDITSTSKFDGYKRRLVSPMRTSSLNESVGRYSQLYDTCFNREAKHPRSERLKLKAPKKSSLLRTPKTFQRFLSLPNLTDYFSQSEETSVLLPPQIPVRKFGEKTTSLSTSVDNITIPQKVSKSIQKEMFIRSDTGSGSDEDKEESNQKNNIGDDDVYENLTDSGESTSMVAKAKSISFSDSSFLDDSIDFDDKLSLPEDSRIKPRSIDGLGHVIEQFQEAKIVNYQELERSEDDFLKFDFLNNHVNLEIPGLEVDANSEAEFNYVRDVLELSGLFTDYDTLGIWYSNDQPIDPTVYEELEGCLLLDPKCSGGVHSNHLLLFDMINEVLVEIFGRSYSYYPKPLSSLSHVHPMPAGNHILREVWTLIRWYLSSNVELYPSLDYYVSRDLARSDGWINLQFDSECVGLELDDLIFDDLLEEIIYS 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1942 854 MobiDBLite consensus disorder prediction 563 592 - -
Dere14g1942 854 PANTHER PROTEIN TRM32 1 854 IPR044257 -
Dere14g1942 854 Pfam Protein of unknown function (DUF3741) 223 266 IPR022212 -
Dere14g1942 854 MobiDBLite consensus disorder prediction 564 582 - -
Dere14g1942 854 MobiDBLite consensus disorder prediction 47 75 - -
Dere14g1942 854 MobiDBLite consensus disorder prediction 1 24 - -
Dere14g1942 854 Pfam Domain of unknown function (DUF4378) 692 850 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1942 Dere-ChrDere14 25124938 25130459 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1942 1 844 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 31.749 3.31e-93 310