Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1926 ATGGCAAGACCATACCAAACATTTGCCTACCAGGCTCTCCTTCTGCGTTTTGTTCATTCTCAATCTCTTCATTCCTTGCTCCTACCCTTGTGGCCTTGGAAGCACCGAACACAGAAGATTGGAGGGATGGAGTCCCTTGGTTTTGTGGATGACCTGTTGAATTTCTCATCAGACATAGGTGAGGAAGATGATGAGGAAGATAAACCCAGGAAAATTCTTCCTTCACTTAGCCTTAAATGCAGTGATTCGGCATCATTTAATGCTTTGGACACAGATGATCCAACTCGTTCTTTTTCTGAGTTTGCAGAAGAAGAGCTTGAATGGCTATCCAACAAAGATGCTTTCCCTGCTGTTGAAACATTTGTTGACATGCTCTCTGTTCAACCCAACCAATTGAAGCACCAAACAACAGCCTCAACGCTTGAATACTGTGCAAGCAGTACCAACAGTAACAATAGCACTAACAGTGTTACTCTCTTAGATGGCTATAATTGTCTTAAGGTTCCTGTCCGAGCACGAAGCAAGCGTCGGAGTAGGCATCAGCATGGCCTTGCTGACATCTCCAGCCAGCAATTCTGGTGGAATCAACCAAGTAACAAAATTACCAAAGCTGAAGCAGTGATAACAATCTCAATAATAGGGAGGAAATGCCAGCACTGCAGAGCAGAAAAAACTCCACAATGGCGGGCAGGGCCCTTTGGTCCAAAAACGCTTTGTAATGCATGTGGGGTTAGGTTTAAGTCTGGGAGGCTAGTGCCTGAATACCGCCCTGCAAGTAGCCCTACTTTTCGTAGTGAGTTGCATTCAAATTCCCACAGGAAGATAATGGAGATGAGAAAGCAAAAGCAAATGGGAGGCCTCGGATAA 867 0.4498 MARPYQTFAYQALLLRFVHSQSLHSLLLPLWPWKHRTQKIGGMESLGFVDDLLNFSSDIGEEDDEEDKPRKILPSLSLKCSDSASFNALDTDDPTRSFSEFAEEELEWLSNKDAFPAVETFVDMLSVQPNQLKHQTTASTLEYCASSTNSNNSTNSVTLLDGYNCLKVPVRARSKRRSRHQHGLADISSQQFWWNQPSNKITKAEAVITISIIGRKCQHCRAEKTPQWRAGPFGPKTLCNACGVRFKSGRLVPEYRPASSPTFRSELHSNSHRKIMEMRKQKQMGGLG 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1926 288 FunFam GATA transcription factor 208 287 - -
Dere14g1926 288 CDD ZnF_GATA 216 264 IPR000679 GO:0006355|GO:0043565
Dere14g1926 288 ProSiteProfiles GATA-type zinc finger domain profile. 211 247 IPR000679 GO:0006355|GO:0043565
Dere14g1926 288 ProSitePatterns GATA-type zinc finger domain. 217 242 IPR000679 GO:0006355|GO:0043565
Dere14g1926 288 PANTHER GATA TRANSCRIPTION FACTOR 48 283 - -
Dere14g1926 288 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 214 274 - -
Dere14g1926 288 Pfam GATA zinc finger 217 250 IPR000679 GO:0006355|GO:0043565
Dere14g1926 288 SMART GATA_3 211 261 IPR000679 GO:0006355|GO:0043565
Dere14g1926 288 Gene3D - 211 264 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1926 Dere-ChrDere14 24643254 24651200 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1926 43 285 C2C2-Gata Transcription Factor Family AT3G24050 43.273 3.72e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Dere14g1926 GATA 5.7e-16 CL0167