Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1915 ATGCATGAAGAAACTCAAACCTCAGCTCTTGGTGACTTCACTCCACTTCGCTGGTCAGTAGAGGAATCACCGGATTGCTGTTGTGGTTGCTGCTGTTGCGGTGGCTCTGTTCGCCCCTGTTCAAGCTATTTGGAGCAGAGGAGGGCGTTCACAGCTTCAGCTCAGTCTGCTTCTCTTCTTCCTTCTACATTCTTGGTTCCAACTCCTGCTTCTCGATTTTCTGCTCCACTCCTTCGGTTCCTGCTTCGCGTGATTGTTCTTCTGGTTTTCCATTTCTTGAAAGACAATCTTAGTGCAGAAATTCAAACCATGAAGGCAAGCAAGGGGAAGACGGCAGTAAAGAACTCAAAGGAAGCACTGAAGCCAGTTGATGATCGAAAGGTTGGCAAGCGAAAGGCTGCATCAAAACCTGTTAAGAGTAGCACACGGAAGGCCAACAAAGAGAGGAATGCCAAGAAAGATCCCAACAAATCGAAAAGACTGCCTAGTGCTTTTCTCGTCTTCCTTGAGGAGTTCAGAAAGACCTTCAAGGCAGAAAATCCTAATGTGAAGGCTGTATCAGTTGTTGGGAAAGCTGGAGGAGAGAAATGA 591 0.4704 MHEETQTSALGDFTPLRWSVEESPDCCCGCCCCGGSVRPCSSYLEQRRAFTASAQSASLLPSTFLVPTPASRFSAPLLRFLLRVIVLLVFHFLKDNLSAEIQTMKASKGKTAVKNSKEALKPVDDRKVGKRKAASKPVKSSTRKANKERNAKKDPNKSKRLPSAFLVFLEEFRKTFKAENPNVKAVSVVGKAGGEK 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1915 196 Pfam HMG (high mobility group) box 159 195 IPR009071 -
Dere14g1915 196 MobiDBLite consensus disorder prediction 105 158 - -
Dere14g1915 196 MobiDBLite consensus disorder prediction 141 158 - -
Dere14g1915 196 MobiDBLite consensus disorder prediction 111 131 - -
Dere14g1915 196 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 107 196 IPR031061 -
Dere14g1915 196 SUPERFAMILY HMG-box 145 191 IPR036910 -
Dere14g1915 196 Gene3D High mobility group box domain 140 196 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1915 Dere-ChrDere14 24166820 24167715 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Dere14g1915 HMG_box 4.6e-06 CL0114