Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1888 ATGCAATTTCTCAAATTATACCACACAGTTCCATATTCTTGGAGTAATTTGTACTCTATTACCTCCAGATCCTTTCTTTCTCTGTTCTCTACTGTTTCTTCACCAACTCAAGCCTCAAAGGAACACATTTCGATCATTGATTACCTGAATGCCAACTTCAACTTCTCCGAAACTCAGTCCATCAATATATCTAAAAGAGTTTTTCAGGCTAAGTGTCCTCAACATGCCTTGTCTGTGCTGAATTTTTTCAGACAGATTGGACTCTCTGAAGGCCAGATTCAATCTATGATTTGTCAAAAACCCCAAATACTGTTTTCAGATATTGATAAAACCCTGAAGCCAAAAATTGAGTACTTCAAGCTACTAGGTTTTGAGTTTTCTGATTTAGGCAAGTTTCTTTCCAAGAATTCAACACTTTTGACTTGTAGTCTGAGTAAAGCATTGGTCCCCTCTGTGGAGACTATTAGGAAAATTGCTTACAATGAGGGAGATTTTATTAAAGTGTTGCACAGATCTGGTCGGATTCTCCCAAAGCACCAAAGAATTTTGCTCAATGTTGCCTTCTTTGAGAGCTGTGGGATCGTAGGGTCTCAGCTTTCACTATTACTCAAACGAAATCCTCAGCTTTTTGCTGCACAACGGTCTCTGCTTCAAAACATTGTTTCGCGGGCTGTAGACATGGGTTTCTGTATAAATTCAAGAATGTTGGTGCATGCGATCTTGGCAATCGGTGGTTTAAGCATCAAAACTTTTGAAAGAAAGTTGGAGTTTATTCAGAGTTGTGGGTTTTCTAAAGATGAGAGTATGCAAATGTTTAGAAGAGCTCCACTTTTGCTTCGAACATCTGAGAAGAAACTAAAGTTTGGAATTGAATTCTTCTTGGATACAATTATGCTACCTAAGTCAGTGCTGGTTCATAAACCTACTATTTTGATGTATAGCATGGAGGATAGGGTGATTCCTCGATTCAAAGTTTTGCAGTTGCTAACGTCAAAAAAGTTACTCAAGAAGAATCCAGGTTTTATTGAAGTATTAAAATTGCCGGAGGAGATATTTTTAGACAAGTATATTTCAAAGTTTAGAGATAGTGCTGAGGCTTTATTGGTGGTTTACAAGGGTCACTCTCTGGAAGATGCTTCTGCATAA 1146 0.3787 MQFLKLYHTVPYSWSNLYSITSRSFLSLFSTVSSPTQASKEHISIIDYLNANFNFSETQSINISKRVFQAKCPQHALSVLNFFRQIGLSEGQIQSMICQKPQILFSDIDKTLKPKIEYFKLLGFEFSDLGKFLSKNSTLLTCSLSKALVPSVETIRKIAYNEGDFIKVLHRSGRILPKHQRILLNVAFFESCGIVGSQLSLLLKRNPQLFAAQRSLLQNIVSRAVDMGFCINSRMLVHAILAIGGLSIKTFERKLEFIQSCGFSKDESMQMFRRAPLLLRTSEKKLKFGIEFFLDTIMLPKSVLVHKPTILMYSMEDRVIPRFKVLQLLTSKKLLKKNPGFIEVLKLPEEIFLDKYISKFRDSAEALLVVYKGHSLEDASA 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1888 381 Pfam mTERF 256 352 IPR003690 GO:0003690|GO:0006355
Dere14g1888 381 Pfam mTERF 80 159 IPR003690 GO:0003690|GO:0006355
Dere14g1888 381 Pfam mTERF 150 259 IPR003690 GO:0003690|GO:0006355
Dere14g1888 381 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Dere14g1888 381 SMART mt_12 200 230 IPR003690 GO:0003690|GO:0006355
Dere14g1888 381 SMART mt_12 301 332 IPR003690 GO:0003690|GO:0006355
Dere14g1888 381 SMART mt_12 166 195 IPR003690 GO:0003690|GO:0006355
Dere14g1888 381 SMART mt_12 234 264 IPR003690 GO:0003690|GO:0006355
Dere14g1888 381 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Dere14g1888 381 SMART mt_12 269 300 IPR003690 GO:0003690|GO:0006355
Dere14g1888 381 Gene3D Transcription termination factor 3, mitochondrial 49 177 IPR038538 -
Dere14g1888 381 Gene3D Transcription termination factor 3, mitochondrial 178 362 IPR038538 -
Dere14g1888 381 PANTHER CGI-12 PROTEIN-RELATED 44 359 IPR003690 GO:0003690|GO:0006355
Dere14g1888 381 FunFam Mitochondrial transcription termination factor-like 144 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1888 Dere-ChrDere14 23594735 23595880 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dere14g1888 mTERF 1.4e-06 No_clan