Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1875 ATGATGATGATGATGACGAAGCCACTTTTATATCTGCTGGTTTCAGTTTCTTGTCTCTTTGCTTGCTTGGGAGACAATGACATAGCTGTCCAGTTGAACGACGATGTTCTTGGCCTGATTGTGTTCAAATCCGACCTTCACGACTCTTCTTCTTATCTGGCTTCATGGAACGAGGACGACGCGAGCCCGTGCTCGTGGCAGTTCGTGCGGTGTAATCCGGTGACCGGAAGAGTGTCCGAGGTGTCACTTGACGGCCTAGGTTTATCCGGGAAGATAGGAAGAGGTCTTGAGAAACTGCAGAATCTCAAGGTATTGTCCCTCTCTCATAACAACCTAACTGGAAGCATTAGTCCATCACTTGCTCTCTCCAACACTCTTCAAAGCCTAAACCTCAGTCACAACAGTCTCTCTGGTCCCATCCCCACTTCTTTTGTGAATATGGCTTCAATAAGGTCTCTTGATCTCTCAGAGAATTCATTCTCGGGAAATCTCCCAGAAAACTTGTTTCAGAACTGTTTCTCTCTTCATTACCTTTCTCTAGCTTGGAACATGTTTGAAGGCTCAATCCCCAGCACAGTCTCAAGATGTTCCTCATTGAACAGCCTTAATCTTTCCAACAATCGGTTCAGTGGTAATGTGGATTTCAATGGGATTTGGTCTTTGAAAAGGCTTAGGACTTTGGATCTGTCAAACAATGTCTTATCTGGAAACTTACCGTCAGGAATATCAGCCATACATAACTTGAAAGAGATGCAATTACAAGGTAATCACTTGTCTGGACCATTACCTTCTGATATAGGACTCTGCCTGCATTTGAATAGGTTAGATTTTAGTGATAATCTGTTCAGTAATGCACTACCAGACTCACTTGGGAGACTTAACTCTGTGACCTTCTTTAAAGCTTCAAACAATTTGTTTACCAGTGAACTTCCTCAGTGGATTAGTACCATGACAAGTCTGGAGTACCTTGATCTCTCAGACAATCAGTTCGCCGGAAACATCCCAGCTTCGATCGGCGATCTGACATCGCTGAGTTATCTGAGTCTTTCAAATAACAAGCTTGAGGGAAGCATACCATCATCGCTGGGTTCATGTGCTAAGTTATCATTCATATATCTCAGAGGTAATGGTTTCAATGGTAGCATACCAGAGGGACTGTTTGGCCTAAGACAAATGGAGGAGATAGACTTGTCTCATAATGAATTGAAGGGTACAATTCCTGCAGAAATAGGTCTTGTTTCAAAGCTAAGATATTTGAATCTGTCTTGGAATGAGTTTCACTCTCAAATGCCTCCAGAATTGGGTCTCCTTCAGAATCTGACAGTTTTAGATCTTCAGAGCAATTCACTGTATGGTTCTATTCCAGAGCATTTATGTGATTCAGGCAATTTGGCCATCCTTCAGCTTGATGGAAACTCATTGAATGGTGCTATTCCAGATGAGATTGGGAATTGTACATTGCTTTCCTTGCTGAGTTTGTGTCACAACAATTTGAGTGGTTCAATTCCCAAGTCCATGTCAAAGCTGAACAAGCTCAAAGTGTTGAAATTGGAGTTCAATAAACTAAGTGGAGAGATACCACAGGAGTTTGGGATGCTTCAGAATCTTCTTGCTGTGAATATCTCATACAACAGGCTCACAGGCAGGCTTCCTAGTGGAAGCATATTTGAAAACTTAGACAAAAGTTCCTTAGAAGGAAACTTAGGTCTTTGCTCACCTTTACTCAAAGGACCATGCAAGATGAATGTGCCAAAACCGCTAGTGCTTGACCCTAATGCCTATAACAACCAAATGGGCCCTCACAATAGGCATAGAAATGAATCCTCTATGACTATGCCAAGCATAATCCATCACCACAAGTTCCTAAGTGTTTCTGCTATTGTAGCAATTTCTGCAGCTTTTGTGATCATATTAGGAGTCATTTCCATTAGCCTTCTGAATGTTTCTGTAAGGAGAAAGCTAGCATTTGTCGACAATGCTTTGGAAAGCATGTGCTCAAGCTCTTCAAGATCAGGAAGTCCAGCCACAGGGAAGCTTATTCTGTTTGATTCCGGACGGTCCTCGCTTGATTCAATCAGCAACCCGGAAAACTTGCTCAGCAAGGCATCTGAGATAGGAGAAGGAGTGTTTGGAACAGTCCACAAGGTTCCTTTGGGCTCACAAGGTAGAATGGTGGCAATCAAGAGGCTAGTGACTTCAAACTTAGTCCAATACCCTGAAGACTTTGATAGGGAAGTTAGAACCCTGGGAAAAGCTAGGCACCCAAATCTAATAGCATTGAAAGGATACTATTGGACTCCTCAAATGCAACTTCTAATCACAGAGTTTGCACCAAATGGTAGCTTGCAAGCCAAGCTACATGAAAGGCTTCCTTCAGCTCCACCTCTTTCATGGGCTAATAGGTTCAAAATTCTGCTTGGAACAGCAAAAGGGCTTGCTCATCTGCACCATTCATTCCGCCCGCCAATCATTCACTACAACATAAAGCCAAGCAACATTCTACTTGATGAGAATTGCAACCCGAAGATCTCGGATTTCGGGTTGGCTCGGCTTCTGACAAAGCTAGACAGGCATGTGATGAGCAATAGGTTTCAGAGTGCATTAGGATATGTAGCACCAGAATTGGCATGCCAGAGCCTGAGGGTGAATGAGAAGTGTGATATCTATGGCTTTGGGGAGATGATTCTTGAGATTGTGACTGGCAGGAGGCCAGTGGAATATGGAGAAGACAATGTGGTGATACTGAAAGACCATGTGAGAGTGATGCTTGAGCATGGGAATGTGTTGGAATGTGTGGATCCAAGCATGAGTGAGTACCCTGAGGATGAGGTACTGCCAGTTCTGAAGCTAGCTTTGGTATGCACCTCTCAGATACCTTCAAGCAGGCCTTCTATGGCAGAAGTGGTACAAATTCTGCAGGTCATTAAAACTCCTGTTCCTCAAAGAATGGAAATGTTTTAA 2961 0.433 MMMMMTKPLLYLLVSVSCLFACLGDNDIAVQLNDDVLGLIVFKSDLHDSSSYLASWNEDDASPCSWQFVRCNPVTGRVSEVSLDGLGLSGKIGRGLEKLQNLKVLSLSHNNLTGSISPSLALSNTLQSLNLSHNSLSGPIPTSFVNMASIRSLDLSENSFSGNLPENLFQNCFSLHYLSLAWNMFEGSIPSTVSRCSSLNSLNLSNNRFSGNVDFNGIWSLKRLRTLDLSNNVLSGNLPSGISAIHNLKEMQLQGNHLSGPLPSDIGLCLHLNRLDFSDNLFSNALPDSLGRLNSVTFFKASNNLFTSELPQWISTMTSLEYLDLSDNQFAGNIPASIGDLTSLSYLSLSNNKLEGSIPSSLGSCAKLSFIYLRGNGFNGSIPEGLFGLRQMEEIDLSHNELKGTIPAEIGLVSKLRYLNLSWNEFHSQMPPELGLLQNLTVLDLQSNSLYGSIPEHLCDSGNLAILQLDGNSLNGAIPDEIGNCTLLSLLSLCHNNLSGSIPKSMSKLNKLKVLKLEFNKLSGEIPQEFGMLQNLLAVNISYNRLTGRLPSGSIFENLDKSSLEGNLGLCSPLLKGPCKMNVPKPLVLDPNAYNNQMGPHNRHRNESSMTMPSIIHHHKFLSVSAIVAISAAFVIILGVISISLLNVSVRRKLAFVDNALESMCSSSSRSGSPATGKLILFDSGRSSLDSISNPENLLSKASEIGEGVFGTVHKVPLGSQGRMVAIKRLVTSNLVQYPEDFDREVRTLGKARHPNLIALKGYYWTPQMQLLITEFAPNGSLQAKLHERLPSAPPLSWANRFKILLGTAKGLAHLHHSFRPPIIHYNIKPSNILLDENCNPKISDFGLARLLTKLDRHVMSNRFQSALGYVAPELACQSLRVNEKCDIYGFGEMILEIVTGRRPVEYGEDNVVILKDHVRVMLEHGNVLECVDPSMSEYPEDEVLPVLKLALVCTSQIPSSRPSMAEVVQILQVIKTPVPQRMEMF 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1875 986 Gene3D Ribonuclease Inhibitor 190 286 IPR032675 -
Dere14g1875 986 Gene3D Transferase(Phosphotransferase) domain 1 781 984 - -
Dere14g1875 986 ProSitePatterns Protein kinases ATP-binding region signature. 705 728 IPR017441 GO:0005524
Dere14g1875 986 SUPERFAMILY L domain-like 79 288 - -
Dere14g1875 986 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 32 192 - -
Dere14g1875 986 SUPERFAMILY RNI-like 216 551 - -
Dere14g1875 986 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 288 382 - -
Dere14g1875 986 PRINTS Leucine-rich repeat signature 224 237 - -
Dere14g1875 986 PRINTS Leucine-rich repeat signature 341 354 - -
Dere14g1875 986 ProSiteProfiles Protein kinase domain profile. 699 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1875 986 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 193 287 - -
Dere14g1875 986 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 328 973 - -
Dere14g1875 986 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 777 981 - -
Dere14g1875 986 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Dere14g1875 986 Pfam Leucine rich repeat 101 159 IPR001611 GO:0005515
Dere14g1875 986 Pfam Leucine rich repeat 319 377 IPR001611 GO:0005515
Dere14g1875 986 SUPERFAMILY Protein kinase-like (PK-like) 691 976 IPR011009 -
Dere14g1875 986 CDD STKc_IRAK 705 973 - -
Dere14g1875 986 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Dere14g1875 986 SMART LRR_typ_2 221 245 IPR003591 -
Dere14g1875 986 SMART LRR_typ_2 389 412 IPR003591 -
Dere14g1875 986 SMART LRR_typ_2 147 171 IPR003591 -
Dere14g1875 986 SMART LRR_typ_2 99 124 IPR003591 -
Dere14g1875 986 SMART LRR_typ_2 437 461 IPR003591 -
Dere14g1875 986 SMART LRR_typ_2 413 436 IPR003591 -
Dere14g1875 986 SMART LRR_typ_2 341 365 IPR003591 -
Dere14g1875 986 SMART LRR_typ_2 317 340 IPR003591 -
Dere14g1875 986 SMART LRR_typ_2 509 532 IPR003591 -
Dere14g1875 986 Pfam Protein kinase domain 701 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1875 986 Gene3D Phosphorylase Kinase; domain 1 699 780 - -
Dere14g1875 986 ProSiteProfiles Leucine-rich repeat profile. 101 123 IPR001611 GO:0005515
Dere14g1875 986 Gene3D Ribonuclease Inhibitor 292 582 IPR032675 -
Dere14g1875 986 Gene3D Ribonuclease Inhibitor 35 189 IPR032675 -
Dere14g1875 986 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 693 776 - -
Dere14g1875 986 FunFam Inactive leucine-rich repeat receptor-like protein kinase 390 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1875 Dere-ChrDere14 23341661 23345374 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1875 4 983 Receptor kinase-like Gene Family AT3G28040 61.637 0.0 1193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Dere14g1875 Pkinase 1e-39 CL0016