Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1852 ATGATGAACCAAAGTCGCACTGAAACTGGTATTAGAGGAACGAAAGGGTATGTCGCACCGGATTGGTTCCGGAGTGCACCAATCAGTGCCAAGGTTGATGTATACAGTTTTGGTGTGCTGCTGCTGGAGATCATTTGTTGCAGGAAAAATGTAGACATGGGGATTGGCAGTGAAGAGAAGACAATTTTGATTGATTGGGCATATGACTGTTATAGCAGTAGAAGATTAGACCTTCTGGTTGAAAATGATGATGAGGTTGTCAATGACATGAGGCTGGAAAGGTTTGTGATGATAGCTATTTGGTGCCTCCAAGAAGATCCCTCCATTAGGCCAACAATGAAGAAGGTTATGTTGATGCTGGAAGGTTTAGCTCAAGTTACAGCTCCTCCAAGTCCCTGCCCATATAATTCTGTCAGTTGCAATTTATAA 429 0.4289 MMNQSRTETGIRGTKGYVAPDWFRSAPISAKVDVYSFGVLLLEIICCRKNVDMGIGSEEKTILIDWAYDCYSSRRLDLLVENDDEVVNDMRLERFVMIAIWCLQEDPSIRPTMKKVMLMLEGLAQVTAPPSPCPYNSVSCNL 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1852 142 Gene3D Transferase(Phosphotransferase) domain 1 1 136 - -
Dere14g1852 142 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 134 - -
Dere14g1852 142 SUPERFAMILY Protein kinase-like (PK-like) 5 133 IPR011009 -
Dere14g1852 142 Pfam Protein kinase domain 4 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g1852 142 ProSiteProfiles Protein kinase domain profile. 1 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1852 Dere-ChrDere14 22648248 22648676 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1852 5 122 Receptor kinase-like Gene Family AT1G60800 37.815 4.89e-25 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dere14g1852 Pkinase 9.8e-11 CL0016