Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1843 ATGGAAGAGCAGAGGAGAAGAATGGGTGGTGGCAACAACTTAAACTCCGTATTTTATGCTCAGTCCTACCATCCAATTCAAGCTGGCAGCATAGACGGCACTGATATTCTTCCTCATGATAATGCTGTTTATCGAGCTCTTCTCTGTTCTTCTGCTGGCCTCTATGACCCATTTGGCGATCCGAAGGCCACGGGAGACCCATATTGCACTGTCTTTGTAGGTCGCCTCTCTCGCCTCACCACCGAAGAAACTCTCCACAAGGTTATGAGCAAGTATGGTCGGGTGAAGAACTTACGTTTGGTCAGGGACATTGTAACTGGTGCCTCCCGTGGTTATGCTTTTGTTGAATATGAAACTGAAAAAGAGATGCGGCGTGCATACATGGATGCTCATCATTCTATTATCGATGGTTGTGAAATCATAGTTGATTATAACAGACAGCAATTGATGGCTGGGTGGATCCCCAGAAGGTTAGGTGGTGGTCTTGGTGGTAAGAAGGAATCAGGACAACTTCGTTTTGGGGGAAGAGAAAGACCATTTCGAGCTCCCCTGAGACCCATACCATATAAGGATTTGGAGAGACTTGGAATTCCACCTCCACCTGAAGGAAGATACATGACACGCTTCCAGGTCCCATCACCTCCTAGAAGAGAAAGGAATGTTCTAGATAGGGAAGATGGCTCTCGTAGAAGGAGAAGGAGTTCTAAGGAGAGGACGGAAGGTGCTCTTGAAAGTCCAGCTGAAATTGAGGAAAGGCGCTATAAAAGTAGTTCAATTCACCGAGAGGTCCATTCTCATGGAAGGAGCTCTTTGGAAAGGCGAGAAGAGGGAGGTGGCCATTACCGTAGTAGGAGTTCAGCTGAGAAGGAACGTCATCACAGGAGCTCTGCAGAAAGGAGGGAACACTCTCGGAAAAGGAAAGAAAGAGATGAACACTCTTCGAGCTCTGCAGAAAGGAGGGAACACTCTCGTAGAAAGAAAGAGAGAGATGAACGCTCTTTGAGGCGACAAAAACATGGCCATCATTCCCATCTTGAGGACTAG 1044 0.4722 MEEQRRRMGGGNNLNSVFYAQSYHPIQAGSIDGTDILPHDNAVYRALLCSSAGLYDPFGDPKATGDPYCTVFVGRLSRLTTEETLHKVMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEKEMRRAYMDAHHSIIDGCEIIVDYNRQQLMAGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIPYKDLERLGIPPPPEGRYMTRFQVPSPPRRERNVLDREDGSRRRRRSSKERTEGALESPAEIEERRYKSSSIHREVHSHGRSSLERREEGGGHYRSRSSAEKERHHRSSAERREHSRKRKERDEHSSSSAERREHSRRKKERDERSLRRQKHGHHSHLED 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1843 347 SUPERFAMILY RNA-binding domain, RBD 57 175 IPR035979 GO:0003676
Dere14g1843 347 MobiDBLite consensus disorder prediction 217 347 - -
Dere14g1843 347 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 69 147 IPR000504 GO:0003723
Dere14g1843 347 Gene3D - 56 176 IPR012677 -
Dere14g1843 347 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 71 140 IPR000504 GO:0003723
Dere14g1843 347 SMART rrm1_1 70 143 IPR000504 GO:0003723
Dere14g1843 347 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD 18 238 - -
Dere14g1843 347 FunFam Small nuclear ribonucleoprotein U11/U12 subunit 35 56 177 - -
Dere14g1843 347 MobiDBLite consensus disorder prediction 164 347 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g1843 69 144 Eukaryotic Initiation Factors Gene Family AT2G23350 27.632 1.03e-06 48.5